rs6127742 Rat Genome Database

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Variant: rs6127742 -  Homo sapiens

RGD ID: 155846368
RS ID: rs6127742
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: BPI  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh38 20 38,322,148
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs6127742Humanneutrophil phagocytosis trait  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:34648354

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs6127742Humanbactericidal permeability-increasing protein measurement  IAGP 405850206 GWAS_CATALOGPMID:34648354
Experimental Data Annotations     Click to see Annotation Detail View

Vertebrate Trait


Variant Details
Variant Transcripts
Gene Symbol:BPI
Accession:XM_024451972
Location:INTRON

Gene Symbol:BPI
Accession:XM_047440394
Location:INTRON

Gene Symbol:BPI
Accession:NM_001725
Location:INTRON

Gene Symbol:BPI
Accession:XM_047440393
Location:INTRON

Gene Symbol:BPI
Accession:XM_047440395
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST90161970 GWAS Catalog