Strain Report - Rat Genome Database

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Strain: LOU.BN-(D5Rat59-rs13448399)/Bbb-/+

Symbol: LOU.BN-(D5Rat59-rs13448399)/Bbb-/+
Strain: LOU.BN-(D5Rat59-rs13448399)-/+
Substrain: Bbb
RGD ID: 8662958
Citation ID: RRID:RGD_8662958
Ontology ID: RS:0003795
Also Known As: LOU.BN-(D5Rat59-rs13448399)/Bbb-/+; LOU.BN(chr5)F
Type: congenic
Available Source: Not Available
Origination: Max-Delbruck-Center for Molecular Medicine, Berlin, Germany
Description: this heterozygous congenic strain is produced by backcrossing LOU.BN-(D5Rat59-D5Rat133)/Bbb to LOU/MBbb
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.252,282,226 - 2,282,446RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.051,666,587 - 5,649,731RGD_MAPPER_PIPELINERnor6.0
Rnor_5.051,662,934 - 10,489,561RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.451,368,223 - 5,230,907RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Protease inhibitor 15, a candidate gene for abdominal aortic internal elastic lamina ruptures in the rat. Falak S, etal., Physiol Genomics. 2014 Jun 15;46(12):418-28. doi: 10.1152/physiolgenomics.00004.2014. Epub 2014 May 1.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D5Rat59)
Rat AssemblyChrPosition (strand)Source
mRatBN7.252,282,226 - 2,282,446 (+)MAPPER
Rnor_6.051,666,587 - 1,666,805NCBI
Rnor_5.051,662,934 - 1,663,152UniSTS
RGSC_v3.451,368,224 - 1,368,442UniSTS
RGSC_v3.451,368,223 - 1,368,442RGD
RGSC_v3.151,368,224 - 1,368,442RGD
Celera51,917,196 - 1,917,414UniSTS
RH 3.4 Map50.0RGD
RH 3.4 Map50.0UniSTS
RH 2.0 Map50.0RGD

Flank 2 / 1 (rs13448399)
Rat AssemblyChrPosition (strand)Source
Rnor_6.055,649,731 - 5,649,731RGD
Rnor_5.0510,489,561 - 10,489,561RGD
RGSC_v3.455,230,907 - 5,230,907RGD
Celera55,603,888 - 5,603,888RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics introgressed region is heterozygous BN/LOU segment that spans 0-5.2 Mb, had weak phenotypes of number of ruptures of the internal elastic lamina (RIEL) even though had BN allele to 45 Mb 8662864