Strain Report - Rat Genome Database

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Strain: FHH.BN(D14Rat98-D14Hmgc4)/Mcwi

Symbol: FHH.BN(D14Rat98-D14Hmgc4)/Mcwi
Strain: FHH.BN(D14Rat98-D14Hmgc4)
Substrain: Mcwi
RGD ID: 8553187
Citation ID: RRID:RGD_8553187
Ontology ID: RS:0003765
Previously known as: FHH.BN(D14Rat98-D14Hmgc4)/Mcwi
Type: congenic
Source: Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: desired segments from BN were introgressed in FHH background
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21413,015,311 - 19,848,266RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01414,673,206 - 21,555,302RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01414,613,528 - 21,463,742RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41414,535,071 - 21,435,476RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. Data registered by Dr. Howard Jacob's group Personal communication between Dr. Howard Jacob's group and the RGD curators.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Shroom3 contributes to the maintenance of the glomerular filtration barrier integrity. Yeo NC, etal., Genome Res. 2015 Jan;25(1):57-65. doi: 10.1101/gr.182881.114. Epub 2014 Oct 1.


Position Markers

Flank 1 / 1 (D14Rat98)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21413,015,311 - 13,015,539 (+)MAPPER
Rnor_6.01414,673,206 - 14,673,433NCBI
Rnor_5.01414,613,528 - 14,613,755UniSTS
RGSC_v3.41414,535,071 - 14,535,299RGD
RGSC_v3.41414,535,072 - 14,535,299UniSTS
RGSC_v3.11414,535,071 - 14,535,299RGD
Celera1413,068,404 - 13,068,631UniSTS
FHH x ACI Map1414.9399RGD
FHH x ACI Map1414.9399UniSTS
Cytogenetic Map14p22UniSTS

Flank 2 / 1 (D14Hmgc4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21419,848,019 - 19,848,266 (+)MAPPER
Rnor_6.01421,555,056 - 21,555,302NCBI
Rnor_5.01421,463,496 - 21,463,742UniSTS
RGSC_v3.41421,435,230 - 21,435,476UniSTS
RGSC_v3.41421,435,229 - 21,435,476RGD
RGSC_v3.41421,383,834 - 21,384,058RGD
RGSC_v3.41421,383,835 - 21,384,058UniSTS
Celera1419,173,188 - 19,173,434UniSTS
Celera1419,122,967 - 19,123,184UniSTS
Cytogenetic Map14p22-p21UniSTS

Additional Information