Strain Report - Rat Genome Database

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Strain: DA.PVG.1AV1-(D10Rat81-D10Rat238)/Kini

Symbol: DA.PVG.1AV1-(D10Rat81-D10Rat238)/Kini
Strain: DA.PVG.1AV1-(D10Rat81-D10Rat238)
Substrain: Kini
RGD ID: 8552313
Citation ID: RRID:RGD_8552313
Ontology ID: RS:0003731
Previously known as: DA.PVG.1AV1-(D10Rat81-D10Rat238)/Kini; DA.PVG.1AV1-Eae18a; NBRP Rat No: 0682
Type: congenic
Source: Center for Molecular Medicine, Neuroimmunology Unit, Karolinska Institutet, Stockholm, Sweden, National BioResource Project for the Rat in Japan
Origin: DA/Kini females were bred to PVG.1AV1/Kini males and male offspring selected for PVG alleles within the fragment. To ensure that mitochondrial DNA was inherited from the DA/Kini strain, female rats were from the DA/Kini strain throughout the breeding program.
Coat Color: agouti
Last Known Status: Cryopreserved Sperm
Research Usage Neurobiology
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21048,075,363 - 60,222,446RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01049,863,561 - 62,214,000RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01049,641,148 - 61,927,099RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41049,618,846 - 62,685,691RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D10Rat81)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21048,075,363 - 48,075,571 (+)MAPPER
Rnor_6.01049,863,561 - 49,863,768NCBI
Rnor_5.01049,641,148 - 49,641,355UniSTS
RGSC_v3.41049,618,846 - 49,619,054RGD
RGSC_v3.41049,618,847 - 49,619,054UniSTS
RGSC_v3.11049,632,469 - 49,632,677RGD
Celera1047,313,812 - 47,314,019UniSTS
SHRSP x BN Map1041.9499UniSTS
SHRSP x BN Map1041.9499RGD
FHH x ACI Map1040.36RGD

Flank 2 / 1 (D10Rat238)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21060,222,310 - 60,222,446 (+)MAPPER
Rnor_6.01062,213,865 - 62,214,000NCBI
Rnor_5.01061,926,964 - 61,927,099UniSTS
RGSC_v3.41062,685,555 - 62,685,691RGD
RGSC_v3.41062,685,556 - 62,685,691UniSTS
RGSC_v3.11062,699,178 - 62,699,314RGD
Celera1059,251,945 - 59,252,078UniSTS
SHRSP x BN Map1046.5699UniSTS
SHRSP x BN Map1046.5699RGD
FHH x ACI Map1050.56RGD
Cytogenetic Map10q24UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance, sib mating 1302502