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Strain Registration

Strain: DA.PVG.1AV1-(D4Rat63-D4Rat84)/Kiru

Symbol: DA.PVG.1AV1-(D4Rat63-D4Rat84)/Kiru
Strain: DA.PVG.1AV1-(D4Rat63-D4Rat84)
RGD ID: 8551874
Citation ID: RRID:RGD_8551874
Ontology ID: RS:0003689
Also Known As: DA.PVG.1AV1-(D4Rat63-D4Rat84)/Kiru; DA.R5(PVG.1AV1)
Type: congenic
Available Source: Not Available
Origination: Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden
Description: Congenic substrain derived from marker assisted selection for PVG.1AV1/Kini chromosome 4 alleles on the DA/ZtmKini recipient strain.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr84154,946,424 - 182,430,611RGD_MAPPER_PIPELINE
mRatBN7.24153,274,175 - 180,699,135RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.04152,598,827 - 182,171,018RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04219,683,260 - 246,313,537RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.44156,442,644 - 185,398,530RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "DA.PVG.1AV1-(D4Rat63-D4Rat84)/Kiru" (RS:0003689)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. High resolution mapping of an arthritis susceptibility locus on rat chromosome 4, and characterization of regulated phenotypes. Ribbhammar U, etal., Hum Mol Genet 2003 Sep 1;12(17):2087-96.

Region

Position Markers

Flank 1 / 1 (D4Rat63)
Rat AssemblyChrPosition (strand)Source
GRCr84154,946,424 - 154,946,579 (+)Marker Load Pipeline
mRatBN7.24153,274,175 - 153,274,330 (+)MAPPER
Rnor_6.04152,598,827 - 152,598,981NCBI
Rnor_5.04219,683,260 - 219,683,414UniSTS
RGSC_v3.44156,442,644 - 156,442,799RGD
RGSC_v3.44156,442,645 - 156,442,799UniSTS
RGSC_v3.14156,687,486 - 156,687,640RGD
Celera4142,126,200 - 142,126,354UniSTS
RH 3.4 Map4981.1UniSTS
RH 3.4 Map4981.1RGD
RH 2.0 Map4972.6RGD
SHRSP x BN Map477.0299RGD

Flank 2 / 1 (D4Rat84)
Rat AssemblyChrPosition (strand)Source
GRCr84182,430,496 - 182,430,611 (+)Marker Load Pipeline
mRatBN7.24180,699,020 - 180,699,135 (+)MAPPER
Rnor_6.04182,170,904 - 182,171,018NCBI
Rnor_5.04246,313,423 - 246,313,537UniSTS
RGSC_v3.44185,398,415 - 185,398,530RGD
RGSC_v3.44185,398,416 - 185,398,530UniSTS
RGSC_v3.14185,643,540 - 185,643,654RGD
Celera4169,180,864 - 169,180,990UniSTS
RH 3.4 Map41096.4UniSTS
RH 3.4 Map41096.4RGD
SHRSP x BN Map499.9UniSTS
SHRSP x BN Map499.9RGD
FHH x ACI Map4113.49RGD

Additional Information