Strain Report - Rat Genome Database

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Strain: BN.LEW-(D10Rat32-D10Rat133)/Ciml

Symbol: BN.LEW-(D10Rat32-D10Rat133)/Ciml
Strain: BN.LEW-(D10Rat32-D10Rat133)
Substrain: Ciml
RGD ID: 8549599
Citation ID: RRID:RGD_8549599
Ontology ID: RS:0003637
Previously known as: BN.LEW-(D10Rat32-D10Rat133)/Ciml; BN.LEWc10-J
Type: congenic
Source: Institut National de la Sante et de la Recherche Medicale, Toulouse, France
Origin: Congenic strain created from parental BN/Rj and LEW/Rj strains.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21051,779,662 - 51,779,830RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01053,630,865 - 53,631,032RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01053,381,898 - 64,823,355RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41053,786,347 - 65,668,639RGD_MAPPER_PIPELINERGSC3.4

Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "BN.LEW-(D10Rat32-D10Rat133)/Ciml" (RS:0003637)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

References - curated
# Reference Title Reference Citation
1. The rat Toxo1 locus directs toxoplasmosis outcome and controls parasite proliferation and spreading by macrophage-dependent mechanisms. Cavailles P, etal., Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):744-9. Epub 2006 Jan 6.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D10Rat32)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21051,779,662 - 51,779,830 (+)MAPPER
Rnor_6.01053,630,865 - 53,631,032NCBI
Rnor_5.01053,381,898 - 53,382,065UniSTS
RGSC_v3.41053,786,348 - 53,786,515UniSTS
RGSC_v3.41053,786,347 - 53,786,515RGD
RGSC_v3.11053,799,971 - 53,800,138RGD
Celera1050,962,770 - 50,962,937UniSTS
RH 3.4 Map10571.8RGD
RH 3.4 Map10571.8UniSTS
RH 2.0 Map10553.8RGD
SHRSP x BN Map1044.1899RGD
FHH x ACI Map1040.36RGD
Cytogenetic Map10q24UniSTS

Flank 2 / 1 (D10Rat133)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01064,823,161 - 64,823,355NCBI
RGSC_v3.41065,668,446 - 65,668,639RGD
RGSC_v3.11065,682,069 - 65,682,262RGD
RH 2.0 Map10614.3RGD
SHRSP x BN Map1046.5699RGD
FHH x ACI Map1052.6699RGD

Additional Information