Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS.LEW-(D5Mco42-D5Mco47)/2Mco

Symbol: SS.LEW-(D5Mco42-D5Mco47)/2Mco
Strain: SS.LEW-(D5Mco42-D5Mco47)/2
Substrain: Mco
RGD ID: 7794704
Citation ID: RRID:RGD_7794704
Ontology ID: RS:0003612
Previously known as: S.LEW(5)x6Bx9x5b; SS.LEW(5)x6Bx9x5b; SS.LEW-(D5Mco42-D5Mco47)/2Mco
Type: congenic
Source: Medical College of Ohio, Toledo, Ohio, USA
Origin: SS.LEW-(D5Mco34-D5Rat108)/Jr was selectively backcrossed with the SS/Jr strain
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25112,175,328 - 116,047,316RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.05116,151,523 - 120,258,299RGD_MAPPER_PIPELINERnor6.0

Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.LEW-(D5Mco42-D5Mco47)/2Mco  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
arterial blood pressure trait  EXP 7495753 RGD 

Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "SS.LEW-(D5Mco42-D5Mco47)/2Mco" (RS:0003612)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
systolic blood pressure


References - curated
# Reference Title Reference Citation
1. Isolation and high-throughput sequencing of two closely linked epistatic hypertension susceptibility loci with a panel of bicongenic strains. Pillai R, etal., Physiol Genomics. 2013 Aug 15;45(16):729-36. doi: 10.1152/physiolgenomics.00077.2013. Epub 2013 Jun 11.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D5Mco42)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25116,047,089 - 116,047,316 (+)MAPPER
Rnor_6.05120,258,073 - 120,258,299RGD
Cytogenetic Map5 RGD

Flank 2 / 1 (D5Mco47)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25112,175,328 - 112,175,546 (+)MAPPER
Rnor_6.05116,151,523 - 116,151,740RGD
Strain QTL Data
Symbol Name Trait
Bp373 Blood pressure QTL 373 arterial blood pressure trait   (VT:2000000)    

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-01-13 SS.LEW-(D5Mco42-D5Mco47)/2Mco    SS.LEW-(D5Mco42-D5Mco47)/2Mco    Name updated 68913 APPROVED
2014-01-13 SS.LEW-(D5Mco42-D5Mco47)/2Mco    SS.LEW-(D5Mco42-D5Mco47)/2Mco    Name updated 68913 APPROVED