Strain Report - Rat Genome Database

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Strain: SS.MNS-(D2Got93-D2Rat222)/Ayd

Symbol: SS.MNS-(D2Got93-D2Rat222)/Ayd
Strain: SS.MNS-(D2Got93-D2Rat222)
Substrain: Ayd
RGD ID: 7421634
Citation ID: RRID:RGD_7421634
Ontology ID: RS:0003588
Also Known As: C2S.M13; SS.MNS-(D2Got93-D2Rat222)/Ayd; DSS.MNS-(D2Got93-D2Rat222)/Lt
Type: congenic
Available Source: Not Available
Origination: Centre Hospitalier de Universite de Montreal (CRCHUM), Quebec, Canada
Description: A segment of chromosome 2 was transferred from MNS/N into the SS/Jr background, the F2 rats were genotyped with markers that resided in the region of interest, heterozygous rat was then backcrossed to SS/Jr rat to duplicate the fragment.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22135,818,873 - 140,253,961RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02140,958,240 - 145,514,793RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02160,649,967 - 164,927,046RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42140,672,373 - 145,318,823RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure


References - curated
# Reference Title Reference Citation
1. Cardiac pathways distinguish two epistatic modules enacting BP quantitative trait loci and candidate gene analysis. Chauvet C, etal., Hypertens Res. 2009 Jul;32(7):631-7. doi: 10.1038/hr.2009.70. Epub 2009 May 22.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D2Got93)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22135,818,873 - 135,819,116 (+)MAPPER
Rnor_6.02140,958,240 - 140,958,482NCBI
Rnor_5.02160,649,967 - 160,650,209UniSTS
RGSC_v3.42140,672,373 - 140,672,616RGD
RGSC_v3.42140,672,374 - 140,672,616UniSTS
RGSC_v3.12140,622,337 - 140,622,579RGD
Celera2130,313,519 - 130,313,761UniSTS
RH 3.4 Map2847.2RGD
RH 3.4 Map2847.2UniSTS
Cytogenetic Map2q26UniSTS

Flank 2 / 1 (D2Rat222)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22140,253,741 - 140,253,961 (+)MAPPER
Rnor_6.02145,514,574 - 145,514,793NCBI
Rnor_5.02164,926,827 - 164,927,046UniSTS
RGSC_v3.42145,318,603 - 145,318,823RGD
RGSC_v3.42145,318,604 - 145,318,823UniSTS
RGSC_v3.12145,268,566 - 145,268,786RGD
Celera2134,732,947 - 134,733,162UniSTS
RH 3.4 Map2863.0RGD
RH 3.4 Map2863.0UniSTS
RH 2.0 Map2728.0RGD
SHRSP x BN Map258.2598RGD
Cytogenetic Map2q26UniSTS

Additional Information