Strain Report - Rat Genome Database

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Strain: SS.SR-(D13Mit9-D13Mit1)/Jr

Symbol: SS.SR-(D13Mit9-D13Mit1)/Jr
Strain: SS.SR-(D13Mit9-D13Mit1)/Jr
Substrain: Jr
RGD ID: 737864
Citation ID: RRID:RGD_737864
Ontology ID: RS:0000914
Previously known as: SS.SR-(D13Mit9-D13Mit1)/Jr; S.R-Ren; SR/JrUcsf-Ren
Type: congenic
Source: J.P.Rapp, Dept. Physiol. & Molecular Med, Medical College of Ohio, P.O. Box 10008, Toledo, OH 43699-0008, USA
Origin: Congenic strain developed by introgressing SR/Jr renin gene into the SS/Jr strain.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2135,994,668 - 53,050,594RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0139,016,742 - 58,537,177RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01314,281,836 - 63,533,335RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41325,430,110 - 55,033,994RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View
Hypotension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Effects of renin gene transfer on blood pressure and renin gene expression in a congenic strain of Dahl salt-resistant rats. St. Lezin EM, etal., J Clin Invest 1996 Jan 15;97(2):522-7
3. Interval mapping and congenic strains for a blood pressure QTL on rat chromosome 13. Zhang QY, etal., Mamm Genome 1997 Sep;8(9):636-41


Position Markers

Flank 1 / 1 (D13Mit9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21353,050,434 - 53,050,594 (+)MAPPER
Rnor_6.01358,537,018 - 58,537,177NCBI
Rnor_5.01363,533,176 - 63,533,335UniSTS
RGSC_v3.41355,033,834 - 55,033,994RGD
RGSC_v3.41355,033,835 - 55,033,994UniSTS
RGSC_v3.11355,047,894 - 55,048,384RGD
Celera1353,246,988 - 53,247,147UniSTS

Flank 2 / 1 (D13Mit1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2135,994,668 - 5,994,833 (+)MAPPER
Rnor_6.0139,016,742 - 9,016,906NCBI
Rnor_5.01314,281,836 - 14,282,000UniSTS
RGSC_v3.41325,430,112 - 25,430,276UniSTS
RGSC_v3.41325,430,110 - 25,430,276RGD
RGSC_v3.11244,201,730 - 44,202,014RGD
Celera136,931,166 - 6,931,330UniSTS
SHRSP x BN Map130.0UniSTS
SHRSP x BN Map130.0RGD
FHH x ACI Map130.0RGD
Cytogenetic Map13 RGD
Strain QTL Data
Symbol Name Trait
Bp159 Blood pressure QTL 159 arterial blood pressure trait   (VT:2000000)    

Additional Information