Strain Report - Rat Genome Database

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Strain: DA.F344-(D7Rat22-D7Rat15)/Nsi

Symbol: DA.F344-(D7Rat22-D7Rat15)/Nsi
Strain: DA.F344-(D7Rat22-D7Rat15
Substrain: Nsi
RGD ID: 7364981
Citation ID: RRID:RRRC_00680
Ontology ID: RS:0003548
Previously known as: DA.F344-(D7Rat22-D7Rat15)/Arb; DA.F344(Cia4a); DA.F344-(D7Rat22-D7Rat15)/Nsi
Type: congenic
Source: The National Institute of Arthritis and Musculoskeletal and Skin Diseases, Bethesda, Maryland, Rat Resource and Research Center
Origin: Congenic strain created by backcrossing F344/NHsd into DA/BklArbNsi 11 times then brother-sister mating to maintain in the homozygous state
Coat Color: agouti
Last Known Status: Cryopreserved Sperm (as of 2019-02-19)
Research Usage arthritis/autoimmunity studies
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27101,772,987 - 101,773,158RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.07111,043,360 - 111,043,530RGD_MAPPER_PIPELINERnor6.0
Rnor_5.07110,975,825 - 110,975,995RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4776,615,341 - 107,428,439RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D7Rat22)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.4776,615,342 - 76,615,501UniSTS
RGSC_v3.4776,615,341 - 76,615,501RGD
RGSC_v3.1776,636,071 - 76,636,231RGD
Celera769,120,095 - 69,120,250UniSTS
RH 3.4 Map7620.3RGD
RH 3.4 Map7620.3UniSTS
RH 2.0 Map7478.6RGD
SHRSP x BN Map745.53RGD
FHH x ACI Map736.75RGD
Cytogenetic Map7q22-q31UniSTS

Flank 2 / 1 (D7Rat15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.27101,772,987 - 101,773,158 (+)MAPPER
Rnor_6.07111,043,360 - 111,043,530NCBI
Rnor_5.07110,975,825 - 110,975,995UniSTS
RGSC_v3.47107,428,268 - 107,428,439RGD
RGSC_v3.47107,428,269 - 107,428,439UniSTS
RGSC_v3.17107,462,499 - 107,462,669RGD
Celera798,242,639 - 98,242,803UniSTS
RH 3.4 Map7694.6UniSTS
RH 3.4 Map7694.6RGD
RH 2.0 Map7536.9RGD
SHRSP x BN Map757.9199RGD
FHH x ACI Map748.9699RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other F344 alleles between: D7Rat22 and D7Rat15. DA alleles at: D7Mit25 and D7Rat88. 2292495
Database Acc Id Source(s)