Strain Report - Rat Genome Database

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Strain: DA.ACI-(D12Mit2-D12Got49)/Nsi

Symbol: DA.ACI-(D12Mit2-D12Got49)/Nsi
Strain: DA.ACI-(D12Mit2-D12Got49)
Substrain: Nsi
RGD ID: 7364970
Citation ID: RRID:RRRC_00671
Ontology ID: RS:0003543
Also Known As: DA.ACI(Cia25) R6; DA.ACI-(D12Mit2-D12Got49)/Nsi
Type: congenic
Available Source: Rat Resource and Research Center
Origination: North Shore-Long Island Jewish Research Institute,350 Community Drive - Manhasset, NY 11030.
Description: Congenic strain created by backcrossing DA/BklArbNsi and ACI/SegHsd 12 times then brother-sister mating to maintain in the homozygous state
Coat Color: agouti
Last Known Status: Cryopreserved Sperm (as of 2019-02-18)
Research Usage arthritis/autoimmunity studies
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21219,610,870 - 23,060,532RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01222,650,702 - 26,079,250RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01224,662,983 - 28,081,151RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41220,932,559 - 24,257,553RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D12Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21219,610,870 - 19,611,091 (+)MAPPER
Rnor_6.01222,650,702 - 22,650,918NCBI
Rnor_5.01224,662,983 - 24,663,199UniSTS
RGSC_v3.41220,932,560 - 20,932,776UniSTS
RGSC_v3.41220,932,559 - 20,932,776RGD
RGSC_v3.11220,922,171 - 20,922,388RGD
Celera1221,386,630 - 21,386,846UniSTS
RH 3.4 Map12280.3RGD
RH 3.4 Map12280.3UniSTS
RH 2.0 Map12205.1RGD
SHRSP x BN Map1222.7RGD
FHH x ACI Map129.01RGD
Cytogenetic Map12q11-q12UniSTS

Flank 2 / 1 (D12Got49)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21223,060,345 - 23,060,532 (+)MAPPER
Rnor_6.01226,079,066 - 26,079,250NCBI
Rnor_5.01228,080,967 - 28,081,151UniSTS
RGSC_v3.41224,257,369 - 24,257,553UniSTS
RGSC_v3.41224,257,368 - 24,257,553RGD
RGSC_v3.11224,120,585 - 24,120,769RGD
Celera1224,813,475 - 24,813,659UniSTS
RH 3.4 Map12357.0UniSTS
RH 3.4 Map12357.0RGD
RH 2.0 Map12261.3RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease regulates arthritis (PIA) severity 2292495
strain_other ACI alleles between: D12Mit2 and D12Got49. DA alleles at: D12Got32 and D12Rat9. 2292495
Database Acc Id Source(s)
RRRC RRRC:00671 RGD