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Strain Registration

Strain: SS.LEW-(D10Rat55-D10Rat120)/Ayd

Symbol: SS.LEW-(D10Rat55-D10Rat120)/Ayd
Strain: SS.LEW-(D10Rat55-D10Rat120)
Substrain: Ayd
RGD ID: 728395
Citation ID: RRID:RGD_728395
Ontology ID: RS:0000855
Also Known As: SS.LEW-(D10Rat55-D10Rat120)/Ayd; S.LEW-D10Rat55/D10Rat120; S.L7
Type: congenic
Available Source: Not Available
Origination: Centre Hospitalier de Universiti de Montrial, Quebec, Canada
Description: A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21085,160,679 - 88,132,643RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01088,140,923 - 91,270,722RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01087,933,406 - 91,041,690RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41089,167,104 - 92,373,412RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Comprehensive Congenic Coverage Revealing Multiple Blood Pressure Quantitative Trait Loci on Dahl Rat Chromosome 10. Palijan A, etal., Hypertension 2003 Oct;42(4):515-22. Epub 2003 Aug 25
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Rat55)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21085,160,679 - 85,160,854 (+)MAPPER
Rnor_6.01088,140,923 - 88,141,097NCBI
Rnor_5.01087,933,406 - 87,933,580UniSTS
RGSC_v3.41089,167,105 - 89,167,279UniSTS
RGSC_v3.41089,167,104 - 89,167,279RGD
RGSC_v3.11089,181,475 - 89,181,649RGD
Celera1083,880,011 - 83,880,185UniSTS
RH 3.4 Map10859.3RGD
RH 3.4 Map10859.3UniSTS
RH 2.0 Map10968.7RGD
FHH x ACI Map1071.36RGD

Flank 2 / 1 (D10Rat120)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21088,132,392 - 88,132,643 (+)MAPPER
Rnor_6.01091,270,472 - 91,270,722NCBI
Rnor_5.01091,041,440 - 91,041,690UniSTS
RGSC_v3.41092,373,047 - 92,373,412RGD
RGSC_v3.41092,373,142 - 92,373,392UniSTS
RGSC_v3.11092,387,512 - 92,387,762RGD
Celera1086,833,490 - 86,833,740UniSTS
RH 3.4 Map10896.1RGD
RH 3.4 Map10896.1UniSTS
RH 2.0 Map101003.1RGD
FHH x ACI Map1072.5RGD
Cytogenetic Map10q32.1UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-03 SS.LEW-(D10Rat55-D10Rat120)/Ayd    SS.LEW-(D10Rat55-D10Rat20)/Ayd    Symbol updated 68687 APPROVED
2012-10-03 SS.LEW-(D10Rat55-D10Rat120)/Ayd    SS.LEW-(D10Rat55-D10Rat20)/Ayd    Name updated 68913 APPROVED
2012-10-03 SS.LEW-(D10Rat55-D10Rat120)/Ayd    SS.LEW-(D10Rat55-D10Rat120)/Ayd    Name updated 68913 APPROVED
2012-10-03 SS.LEW-(D10Rat55-D10Rat120)/Ayd    SS.LEW-(D10Rat55-D10Rat20)/Ayd    Name updated 68913 APPROVED
2012-10-03 SS.LEW-(D10Rat55-D10Rat120)/Ayd    SS.LEW-(D10Rat55-D10Rat20)/Ayd    Symbol updated 68687 APPROVED