Strain Report - Rat Genome Database

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Strain: SS.LEW-(D10Rat119-D10Mgh1)/Ayd

Symbol: SS.LEW-(D10Rat119-D10Mgh1)/Ayd
Strain: SS.LEW-(D10Rat119-D10Mgh1)
Substrain: Ayd
RGD ID: 728388
Citation ID: RRID:RGD_728388
Ontology ID: RS:0000848
Previously known as: S.LC10; S.LEW-D10Rat119/D10Mgh1; SS.LEW-(D10Rat119-D10Mgh1)/Ayd
Type: congenic
Source: Centre Hospitalier de Universiti de Montrial, Quebec, Canada
Origin: A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01053,273,326 - 53,273,444RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41053,675,361 - 53,675,478RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
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Clinical Measurement
mean arterial blood pressure


References - curated
# Reference Title Reference Citation
1. Comprehensive Congenic Coverage Revealing Multiple Blood Pressure Quantitative Trait Loci on Dahl Rat Chromosome 10. Palijan A, etal., Hypertension 2003 Oct;42(4):515-22. Epub 2003 Aug 25
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D10Rat119)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01053,273,326 - 53,273,444NCBI
RGSC_v3.41053,675,361 - 53,675,478RGD
RGSC_v3.11053,688,901 - 53,689,188RGD
RH 3.4 Map10573.7RGD
RH 3.4 Map10573.7UniSTS
RH 2.0 Map10562.7RGD
SHRSP x BN Map1045.3799RGD
FHH x ACI Map1040.36RGD

Flank 2 / 1 (D10Mgh1)
Rat AssemblyChrPosition (strand)Source
Celera10102,748,696 - 102,748,839UniSTS
RH 2.0 Map101407.7RGD
Cytogenetic Map10 RGD

Additional Information