Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS.LEW-(Nos2-D10M11Mit119)/Ayd

Symbol: SS.LEW-(Nos2-D10M11Mit119)/Ayd
Strain: SS.LEW-(Nos2-D10M11Mit119)
Substrain: Ayd
RGD ID: 728167
Citation ID: RRID:RGD_728167
Ontology ID: RS:0000842
Previously known as: SS.LEW-(Nos2-D10M11Mit119)/Ayd; S.L3; SS.LEW-(Nos2-D10M11Mit119)/Um
Type: congenic
Source: Research Centre-CHUM, Montreal, Quebec, Canada
Origin: Strains SS/Jr and LEW were bred for F1 then backcrossed to S to give BC1, this was backcrossed to S to give BC2 and so on till BC5, BC5 was crossed to S to duplicate the recombinant segment
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21063,815,308 - 63,851,208RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01066,188,290 - 66,221,621RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01065,423,626 - 65,456,957RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41065,036,884 - 65,072,453RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Accelerated congenics for mapping two blood pressure quantitative trait loci on chromosome 10 of Dahl rats. Sivo Z, etal., J Hypertens 2002 Jan;20(1):45-53.


Position Markers

Flank 2 / 1 (D10M11Mit119)
Rat AssemblyChrPosition (strand)Source
Cytogenetic Map10 RGD

Flank 1 / 1 (Nos2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21063,815,308 - 63,851,208 (+)NCBI
mRatBN7.2 Ensembl1063,815,308 - 63,851,210 (+)Ensembl
UTH_Rnor_SHR_Utx1068,445,568 - 68,481,178 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01067,950,910 - 67,986,520 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01063,419,659 - 63,455,435 (+)NCBI
Rnor_6.01066,188,290 - 66,221,621 (+)NCBI
Rnor_6.0 Ensembl1066,189,786 - 66,313,190 (+)Ensembl
Rnor_5.01065,423,626 - 65,456,957 (-)NCBI
RGSC_v3.41065,036,884 - 65,072,453 (+)NCBI
RGSC_v3.11065,050,519 - 65,086,394 (+)NCBI
Celera1062,790,940 - 62,826,625 (+)NCBI
Cytogenetic Map10q25NCBI

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Blood pressure effects are directly linked to cardiac hypertrophy, associated with renal hypertrophy 625380