Strain Report - Rat Genome Database

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Strain: SS.LEW-(D10Rat141-D10Mgh1)/Ayd

Symbol: SS.LEW-(D10Rat141-D10Mgh1)/Ayd
Strain: SS.LEW-(D10Rat141-D10Mgh1)
Substrain: Ayd
RGD ID: 728137
Citation ID: RRID:RGD_728137
Ontology ID: RS:0000820
Also Known As: S.L2; SS.LEW-(D10Rat141-D10Mgh1)/Um; SS.LEW-(D10Rat141-D10Mgh1)/Ayd
Type: congenic
Available Source: Not Available
Origination: Research Centre-CHUM, Montreal, Quebec, Canada
Description: Strains SS/Jr and LEW were bred for F1 then backcrossed to S to give BC1, this was backcrossed to S to give BC2 and so on till BC5, BC5 was crossed to S to duplicate the recombinant segment
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21936,511,450 - 36,511,619RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01091,548,145 - 91,548,388RGD_MAPPER_PIPELINERnor6.0
Rnor_6.01940,571,888 - 40,572,056RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01951,402,312 - 51,402,480RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41938,295,381 - 38,295,550RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Utilization of marker-assisted congenics to map two blood pressure quantitative trait loci in Dahl rats. Deng AY, etal., Mamm Genome 2001 Aug;12(8):612-6.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Accelerated congenics for mapping two blood pressure quantitative trait loci on chromosome 10 of Dahl rats. Sivo Z, etal., J Hypertens 2002 Jan;20(1):45-53.

Region

Position Markers

Flank 1 / 1 (D10Rat141)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01091,548,145 - 91,548,388NCBI
Celera1087,100,977 - 87,101,213UniSTS
RH 3.4 Map10901.5UniSTS
RH 3.4 Map10901.5RGD
RH 2.0 Map101009.3RGD
SHRSP x BN Map1067.57RGD
Cytogenetic Map10q32.1UniSTS

Flank 2 / 1 (D19Rat24)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21936,511,450 - 36,511,619 (-)MAPPER
Rnor_6.01940,571,888 - 40,572,056NCBI
Rnor_5.01951,402,312 - 51,402,480UniSTS
RGSC_v3.41938,295,381 - 38,295,550RGD
RGSC_v3.41938,295,382 - 38,295,550UniSTS
RGSC_v3.11938,300,262 - 38,300,431RGD
Celera1935,908,545 - 35,908,713UniSTS
RH 2.0 Map19446.0RGD
FHH x ACI Map1928.02RGD
Strain QTL Data
Symbol Name Trait
Bp72 Blood pressure QTL 72 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Blood pressure effects are directly linked to cardiac hypertrophy 625380
strain_life_disease The mean arterial, diastolic and the systolic pressures are significantly different as compared to the parental SS strain. 69734