Strain Report - Rat Genome Database

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Strain: SHR.BN-(D10Mit4-D10Wox11)/Cub

Symbol: SHR.BN-(D10Mit4-D10Wox11)/Cub
Strain: SHR.BN-(D10Mit4-D10Wox11)
Substrain: Cub
RGD ID: 7241271
Citation ID: RRID:RGD_7241271
Ontology ID: RS:0003414
Previously known as: SHR.BN-(D10Mit4-D10Wox11)/Cub; SHR.BN-RNo10
Type: congenic
Source: Institute of Biology and Medical Genetics, First Faculty of Medicine, Charles University in Prague, Prague, Czech Republic
Origin: Segment of chromosome 10 from BN.Lx/Cub was transferred to SHR/Ola after 9 backcrosses an intercross was done to obtain the desired congenic
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21035,392,267 - 51,786,432RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01036,584,373 - 53,637,634RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01036,354,729 - 53,388,667RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41036,649,906 - 53,793,117RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. Contribution of autosomal loci and the Y chromosome to the stress response in rats. Dumas P, etal., Hypertension 2000 Feb;35(2):568-73
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D10Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21035,392,267 - 35,392,457 (+)MAPPER
Rnor_6.01036,584,373 - 36,584,560NCBI
Rnor_5.01036,354,729 - 36,354,916UniSTS
RGSC_v3.41036,649,906 - 36,650,094RGD
RGSC_v3.41036,649,907 - 36,650,094UniSTS
RGSC_v3.11036,650,904 - 36,651,253RGD
Celera1034,749,309 - 34,749,496UniSTS
SHRSP x BN Map1031.7999UniSTS
SHRSP x BN Map1031.7999RGD
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Wox11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21051,786,282 - 51,786,432 (+)MAPPER
Rnor_6.01053,637,485 - 53,637,634NCBI
Rnor_5.01053,388,518 - 53,388,667UniSTS
RGSC_v3.41053,792,967 - 53,793,117RGD
RGSC_v3.41053,792,968 - 53,793,117UniSTS
RGSC_v3.11053,806,590 - 53,806,740RGD
Celera1050,969,390 - 50,969,539UniSTS
RH 3.4 Map10571.7UniSTS
RH 3.4 Map10571.7RGD
RH 2.0 Map10555.8RGD
Cytogenetic Map10q24UniSTS

Additional Information