Strain Report - Rat Genome Database

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Strain: DA.BN-(D9Wox24-D9Rat44)/Kini

Symbol: DA.BN-(D9Wox24-D9Rat44)/Kini
Strain: DA.BN-(D9Wox24-D9Rat44)
Substrain: Kini
RGD ID: 7241246
Citation ID: RRID:RGD_7241246
Ontology ID: RS:0003408
Also Known As: DA.BN-(D9Wox24-D9Rat44)/Kini; R25
Type: congenic
Available Source: Not Available
Origination: Center for Molecular Medicine, Neuroimmunology Unit, Karolinska Institutet, Stockholm, Sweden
Description: DA/ZtmKini females were mated with BN/Rj males, speed congenic strategy was used to generate these congenics; when the donor genome outside of the congenic segment was removed, two heterozygous animals were intercrossed to produce homozygous rats
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.291,024,537 - 5,109,995RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.092,880,977 - 10,869,489RGD_MAPPER_PIPELINERnor6.0
Rnor_5.092,813,697 - 9,858,600RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.492,948,882 - 2,949,051RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. A role for VAV1 in experimental autoimmune encephalomyelitis and multiple sclerosis. Jagodic M, etal., Sci Transl Med. 2009 Dec 9;1(10):10ra21. doi: 10.1126/scitranslmed.3000278.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D9Wox24)
Rat AssemblyChrPosition (strand)Source
mRatBN7.291,024,537 - 1,024,636 (-)MAPPER
Rnor_6.0910,869,391 - 10,869,489NCBI
Rnor_5.099,858,502 - 9,858,600UniSTS
Celera97,483,005 - 7,483,103UniSTS
Cytogenetic Map9q11UniSTS

Flank 2 / 1 (D9Rat44)
Rat AssemblyChrPosition (strand)Source
mRatBN7.295,109,826 - 5,109,995 (+)MAPPER
Rnor_6.092,880,977 - 2,881,145NCBI
Rnor_5.092,813,697 - 2,813,865UniSTS
RGSC_v3.492,948,882 - 2,949,051RGD
RGSC_v3.492,948,883 - 2,949,051UniSTS
RGSC_v3.192,948,882 - 2,949,051RGD
Celera91,991,507 - 1,991,679UniSTS
SHRSP x BN Map91.33UniSTS
SHRSP x BN Map91.33RGD
FHH x ACI Map90.08RGD
Cytogenetic Map9 RGD

Additional Information