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Strain Registration

Strain: SS.BN-(D13Hmgc41-D13Hmgc23)/Mcwi

Symbol: SS.BN-(D13Hmgc41-D13Hmgc23)/Mcwi
Strain: SS.BN-(D13Hmgc41-D13Hmgc23)
Substrain: Mcwi
RGD ID: 6907436
Citation ID: RRID:RGD_6907436
Ontology ID: RS:0003364
Also Known As: SS.BN-(D13Hmgc41-D13Hmgc23)/Mcwi; Ren1-BN strain; Line13Da
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: These were generated by crossing SS/JrHsdMcwi with SS-Chr 13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21343,830,075 - 43,830,298RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01349,168,131 - 51,182,122RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01354,236,862 - 56,238,470RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41345,282,442 - 47,299,604RGD_MAPPER_PIPELINERGSC3.4






Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Impaired relaxation of cerebral arteries in the absence of elevated salt intake in normotensive congenic rats carrying the Dahl salt-sensitive renin gene. Durand MJ, etal., Am J Physiol Heart Circ Physiol. 2010 Dec;299(6):H1865-74. Epub 2010 Sep 17.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Hmgc41)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21343,830,075 - 43,830,298 (+)MAPPER
Rnor_6.01349,168,131 - 49,168,353NCBI
Rnor_5.01354,236,862 - 54,237,084UniSTS
RGSC_v3.41345,282,442 - 45,282,664UniSTS
Celera1344,164,470 - 44,164,692UniSTS
Cytogenetic Map13q13UniSTS

Flank 2 / 1 (D13Hmgc23)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01351,181,922 - 51,182,122NCBI
Rnor_5.01356,238,270 - 56,238,470UniSTS
RGSC_v3.41347,299,404 - 47,299,604UniSTS
Celera1346,128,882 - 46,129,093UniSTS
Cytogenetic Map13q13UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics This congenic has a 2.0 Mbp fragment of BN chr 13 that contains the BN renin allele 6903245