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Strain Registration

Strain: SS.SHR-(D9Rat7-D9Got111)/Mco

Symbol: SS.SHR-(D9Rat7-D9Got111)/Mco
Strain: SS.SHR-(D9Rat7-D9Got111)
Substrain: Mco
RGD ID: 6903928
Citation ID: RRID:RGD_6903928
Ontology ID: RS:0003338
Also Known As: SS.SHR-(D9Rat7-D9Got111)/Mco; S.SHR(9)x10Ax2
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio
Description: This is a congenic substrain developed by crossing SS.SHR-(D9Rat7-D9Mco93)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2990,719,946 - 90,720,113RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0997,276,144 - 97,276,310RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0983,453,664 - 96,967,940RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4977,172,934 - 89,249,893RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Refined mapping of blood pressure quantitative trait loci using congenic strains developed from two genetically hypertensive rat models. Kumarasamy S, etal., Hypertens Res. 2011 Dec;34(12):1263-70. doi: 10.1038/hr.2011.116. Epub 2011 Aug 4.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Rat7)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0983,565,641 - 83,566,039NCBI
Rnor_5.0983,453,664 - 83,454,062NCBI
RGSC_v3.4977,172,934 - 77,173,331RGD
RGSC_v3.1977,356,219 - 77,356,616RGD
Celera976,788,640 - 76,788,809UniSTS
RH 3.4 Map9757.1UniSTS
RH 3.4 Map9757.1RGD
RH 2.0 Map9802.8RGD
SHRSP x BN Map953.4798RGD
FHH x ACI Map952.29RGD

Flank 2 / 1 (D9Got111)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2990,719,946 - 90,720,113 (+)MAPPER
Rnor_6.0997,276,144 - 97,276,310NCBI
Rnor_5.0996,967,774 - 96,967,940UniSTS
RGSC_v3.4989,249,726 - 89,249,893RGD
RGSC_v3.4989,249,727 - 89,249,893UniSTS
RGSC_v3.1989,454,495 - 89,454,662RGD
Celera988,267,055 - 88,267,221UniSTS
RH 2.0 Map9927.4RGD
Cytogenetic Map9q35UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.SHR-(D9Rat7-D9Got111)/Mco    SS.SHR-(D9Rat7-D9Got111)/Mco    Name updated 68913 APPROVED
2013-08-28 SS.SHR-(D9Rat7-D9Got111)/Mco    SS.SHR-(D9Rat7-D9Got111)/Mco    Name updated 68913 APPROVED
2012-10-08 SS.SHR-(D9Rat7-D9Got111)/Mco    SS.SHR-(D9Rat7-D9Got111)/Mco    Name updated 68913 APPROVED
2012-10-08 SS.SHR-(D9Rat7-D9Got111)/Mco    SS.SHR-(D9Rat7-D9Got111)/Mco    Name updated 68913 APPROVED