Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS-Ldlrem3Mcwi

Symbol: SS-Ldlrem3Mcwi
Strain: SS-Ldlrem3
Substrain: Mcwi
RGD ID: 6484565
Citation ID: RRID:RGD_6484565
Ontology ID: RS:0003259
Alleles: Ldlrem3Mcwi
Also Known As: SS-Ldlrem3Mcwi; SS-Ldlr^[em3Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen Knockouts
Description: This strain was produced by injecting ZFNs targeting the sequence TGCATCCCCAGCCTGTGGgcctgcGACGGGGACCGGGAC into SS/JrHsdMcwi rat embryos. The resulting mutation is a 12-bp frameshift deletion in exon 4.
Last Known Status: Extinct (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2820,270,020 - 20,292,981RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0822,750,425 - 22,773,305RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0822,804,325 - 22,827,199RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4820,824,040 - 20,846,920RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-31 SS-Ldlrem3Mcwi    SS-Ldlrem3Mcwi    Symbol updated 68687 APPROVED
2014-03-31 SS-Ldlrem3Mcwi    SS-Ldlrem3Mcwi    Name updated 68913 APPROVED
2014-03-31 SS-Ldlrem3Mcwi    SS-Ldlrem3Mcwi    Symbol updated 68687 APPROVED
2014-03-31 SS-Ldlrem3Mcwi    SS-Ldlrem3Mcwi    Name updated 68913 APPROVED