Strain Report - Rat Genome Database

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Strain: WF.WKY-(D5Pas1-D5Uwm37)/Uwm

Symbol: WF.WKY-(D5Pas1-D5Uwm37)/Uwm
Strain: WF.WKY-(D5Pas1-D5Uwm37)
Substrain: Uwm
RGD ID: 634359
Citation ID: RRID:RGD_634359
Ontology ID: RS:0001000
Also Known As: WF.WKY-(D5Wox7-D5Uwm37)/Uwm; WF.WKY-(D5Wox7-D5Uwm37)/Uwm; WF.WKY-(D5Pas1-D5Uwm37)/Uwm; line C
Type: congenic
Available Source: Not Available
Origination: University of Wisconsin-Madison
Description: WKY/NHsd rats, carrying a region for resistance to mammary tumors between D5Wox7 and D5Uwm37 on chromosome 5 were mated to WF/NHsd. Progeny were backcrossed to WF for 8-9 generations, selecting for Mcs5 region.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2526,141,669 - 123,935,338RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0526,251,767 - 128,812,854RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0530,952,629 - 132,652,105RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4526,938,679 - 130,527,490RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mammary tumor number

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Physical evidence of Mcs5, a QTL controlling mammary carcinoma susceptibility, in congenic rats. Samuelson DJ, etal., Carcinogenesis 2003 Sep;24(9):1455-60. Epub 2003 Jul 04.

Region

Position Markers

Flank 1 / 1 (D5Pas1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2526,141,669 - 26,141,981 (+)MAPPER
Rnor_6.0526,251,767 - 26,252,076NCBI
Rnor_5.0530,952,629 - 30,952,938UniSTS
RGSC_v3.4526,938,679 - 26,938,988UniSTS
RGSC_v3.1526,938,678 - 26,938,989RGD
Celera525,460,475 - 25,460,784UniSTS

Flank 2 / 1 (D5Uwm37)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25123,935,167 - 123,935,338 (+)MAPPER
Rnor_6.05128,812,684 - 128,812,854NCBI
Rnor_5.05132,651,935 - 132,652,105UniSTS
RGSC_v3.45130,527,319 - 130,527,490RGD
RGSC_v3.45130,527,320 - 130,527,490UniSTS
RGSC_v3.15130,532,545 - 130,532,716RGD
Celera5122,664,816 - 122,664,986UniSTS
Cytogenetic Map5q35UniSTS
Strain QTL Data
Symbol Name Trait
Mamtr1 Mammary tumor resistance QTL 1 mammary gland integrity trait   (VT:0010552)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-07-15 WF.WKY-(D5Pas1-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37)/Uwm    Symbol updated 68687 APPROVED
2013-07-15 WF.WKY-(D5Pas1-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37)/Uwm    Name updated 68913 APPROVED
2013-07-15 WF.WKY-(D5Pas1-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37)/Uwm    Symbol updated 68687 APPROVED
2013-07-15 WF.WKY-(D5Pas1-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37)/Uwm    Name updated 68913 APPROVED
2011-02-23 WF.WKY-(D5Wox7-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37)/Uwm    Name updated 68913 APPROVED
2011-02-23 WF.WKY-(D5Wox7-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37   Name updated 68913 APPROVED
2011-02-23 WF.WKY-(D5Wox7-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37   Symbol updated 68687 APPROVED
2011-02-23 WF.WKY-(D5Wox7-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37   Name updated 68913 APPROVED
2011-02-23 WF.WKY-(D5Wox7-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37   Symbol updated 68687 APPROVED
2011-02-23 WF.WKY-(D5Wox7-D5Uwm37)/Uwm    WF.WKY-(D5Wox7-D5Uwm37)/Uwm    Name updated 68913 APPROVED