Strain Report - Rat Genome Database

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Strain: WKY.SHRSP-(D1Rat200-D1Rat216)/Bbb

Symbol: WKY.SHRSP-(D1Rat200-D1Rat216)/Bbb
Strain: WKY.SHRSP-(D1Rat200-D1Rat216)
Substrain: Bbb
RGD ID: 631694
Citation ID: RRID:RGD_631694
Ontology ID: RS:0001046
Previously known as: W.S.1; WKY.SHRSP-(D1Rat200-D1Rat216)/Bbb
Type: congenic
Source: Max-Delbruck-Center for Molecular Medicine, Berlin, Germany
Origin: This single chromosome 1 congenic strain was constructed by using the double congenic SHRSP strain WKY.SHRSP-(D1Rat200-D1Rat216)(Shbg-Atp1b2) as the donor strain to transfer the chromosome 1 Bp QTL to the WKY background while selecting against the chromosome 10 Bp QTL to retain only the chromosome 10 locus in strain WKY.SHRSP-(D1Rat200-D1Rat216)
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21125,611,501 - 125,611,741RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01133,076,978 - 133,164,521RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01134,116,233 - 205,161,264RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41126,938,969 - 185,923,619RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References - curated
# Reference Title Reference Citation
1. Interaction between blood pressure quantitative trait loci in rats in which trait variation at chromosome 1 is conditional upon a specific allele at chromosome 10. Monti J, etal., Hum Mol Genet 2003 Feb 15;12(4):435-9.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D1Rat200)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21125,611,501 - 125,611,741 (+)MAPPER
Rnor_6.01133,164,282 - 133,164,521NCBI
Rnor_6.01133,076,978 - 133,077,217NCBI
Rnor_5.01134,116,233 - 134,116,472UniSTS
Rnor_5.01134,203,803 - 134,204,042UniSTS
RGSC_v3.41126,938,969 - 126,939,275RGD
RGSC_v3.41126,939,015 - 126,939,254UniSTS
RGSC_v3.11127,017,358 - 127,017,597RGD
Celera1117,762,193 - 117,762,412UniSTS
RH 3.4 Map1986.1UniSTS
RH 3.4 Map1986.1RGD
RH 2.0 Map1669.6RGD
SHRSP x BN Map161.04RGD
FHH x ACI Map162.2RGD

Flank 2 / 1 (D1Rat216)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01205,160,980 - 205,161,264NCBI
RGSC_v3.41185,923,336 - 185,923,619RGD
RGSC_v3.11186,073,217 - 186,073,500RGD
RH 2.0 Map1961.9RGD
SHRSP x BN Map191.4399RGD
FHH x ACI Map186.55RGD
Cytogenetic Map5q22UniSTS
Strain QTL Data
Symbol Name Trait
Bp107 Blood pressure QTL 107 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics This congenic strain carries the SHRSP blood pressure QTL Bp107 on a WKY background 629620