Strain Report - Rat Genome Database

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Strain: SS.MNS-(D10Mit11-Vamp2)/Mco

Symbol: SS.MNS-(D10Mit11-Vamp2)/Mco
Strain: SS.MNS-(D10Mit11-Vamp2)
Substrain: Mco
RGD ID: 631588
Citation ID: RRID:RGD_631588
Ontology ID: RS:0000897
Also Known As: SS/Jr.MNS-(D10Mit11-Vamp2)/Mco; S.M(10a); S.MNS-Mit-RR1023/Syb2; SS.MNS-(D10Mit11-Vamp2)/Mco
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: Fragment of the chromosome 10 derived from MNS and repeated backcross to SS/Jr
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21053,793,581 - 53,797,815RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01055,675,171 - 55,679,405RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01055,418,231 - 55,422,465RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41055,848,264 - 101,848,683RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Is the nitric oxide system involved in genetic hypertension in Dahl rats? Deng AY Kidney Int 1998 Jun;53(6):1501-11.
2. Linkage map and congenic strains to localize blood pressure QTL on rat chromosome 10. Dukhanina OI, etal., Mamm Genome 1997 Apr;8(4):229-35.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Mit11)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.410101,848,470 - 101,848,683RGD
RGSC_v3.110101,862,784 - 101,863,126RGD
Celera1095,940,193 - 95,940,406UniSTS
RH 3.4 Map101094.7RGD
RH 2.0 Map101223.1RGD
Cytogenetic Map10 RGD

Flank 2 / 1 (Vamp2)
Rat AssemblyChrPosition (strand)Source
GRCr81054,292,423 - 54,296,657 (+)NCBI
mRatBN7.21053,793,581 - 53,797,815 (+)NCBI
mRatBN7.2 Ensembl1053,793,923 - 53,797,809 (+)Ensembl
UTH_Rnor_SHR_Utx1058,455,722 - 58,459,585 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01057,944,320 - 57,948,183 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01053,452,495 - 53,456,350 (+)NCBI
Rnor_6.01055,675,171 - 55,679,405 (+)NCBI
Rnor_6.0 Ensembl1055,675,575 - 55,679,450 (+)Ensembl
Rnor_5.01055,418,231 - 55,422,465 (+)NCBI
RGSC_v3.41055,848,264 - 55,852,132 (+)NCBI
RGSC_v3.11055,861,886 - 55,865,753 (+)NCBI
Celera1052,959,486 - 52,963,354 (+)NCBI
Cytogenetic Map10q24NCBI
Strain QTL Data
Symbol Name Trait
Bp249 Blood pressure QTL 249 arterial blood pressure trait   (VT:2000000)    
Bp250 Blood pressure QTL 250 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Blood pressure is significantly lower than that of SS/Jr 619625