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Strain Registration

Strain: SS.LEW-(D10Mco1-D10Mco31)/Ayd

Symbol: SS.LEW-(D10Mco1-D10Mco31)/Ayd
Strain: SS.LEW-(D10Mco1-D10Mco31)/Ayd
Substrain: Ayd
RGD ID: 631220
Citation ID: RRID:RGD_631220
Ontology ID: RS:0000844
Also Known As: SS.LEW-(D10Mco1-D10Mco31)/Ayd; S.L4
Type: congenic
Available Source: Not Available
Origination: Research Centre-CHUM, Montreal, Quebec, Canada
Description: Strains SS/Jr and LEW were bred for F1 then backcrossed to S to give BC1, this was backcrossed to S to give BC2 and so on till BC5, BC5 was crossed to S to duplicate the recombinant segment
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81067,241,334 - 81,034,014RGD_MAPPER_PIPELINE
mRatBN7.21066,743,655 - 80,537,228RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01069,123,603 - 83,411,656RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.01068,786,307 - 83,220,224RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.41069,986,912 - 84,284,667RGD_MAPPER_PIPELINERGSC_v3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.LEW-(D10Mco1-D10Mco31)/AydRatSS.LEW-(D10Mco1-D10Mco31)/Ayd  IEA 7241799 RGD 

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.LEW-(D10Mco1-D10Mco31)/AydRatarterial blood pressure trait  EXP 69734 RGD 

Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "SS.LEW-(D10Mco1-D10Mco31)/Ayd" (RS:0000844)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure

References

References - curated
# Reference Title Reference Citation
1. Utilization of marker-assisted congenics to map two blood pressure quantitative trait loci in Dahl rats. Deng AY, etal., Mamm Genome 2001 Aug;12(8):612-6.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Mco1)
Rat AssemblyChrPosition (strand)Source
GRCr81067,241,334 - 67,241,527 (+)Marker Load Pipeline
mRatBN7.21066,743,655 - 66,743,848 (+)MAPPER
Rnor_6.01069,123,603 - 69,123,793NCBI
Rnor_5.01068,786,307 - 68,786,497UniSTS
RGSC_v3.41069,986,912 - 69,987,103RGD
RGSC_v3.41069,986,913 - 69,987,103UniSTS
Celera1065,692,716 - 65,692,906UniSTS
RGSC_v3.11070,000,535 - 70,000,726RGD
Cytogenetic Map10q26UniSTS

Flank 2 / 1 (D10Mco31)
Rat AssemblyChrPosition (strand)Source
GRCr81081,033,760 - 81,034,014 (+)Marker Load Pipeline
mRatBN7.21080,536,974 - 80,537,228 (+)MAPPER
Rnor_6.01083,411,403 - 83,411,656NCBI
Rnor_5.01083,219,971 - 83,220,224UniSTS
RGSC_v3.41084,284,413 - 84,284,667RGD
RGSC_v3.41084,284,414 - 84,284,667UniSTS
Celera1079,308,972 - 79,309,225UniSTS
RGSC_v3.11084,298,783 - 84,299,037RGD
Cytogenetic Map10 RGD
Strain QTL Data
Symbol Name Trait
Bp71 Blood pressure QTL 71 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease The mean arterial, diastolic and the systolic pressures are significantly different as compared to the parental SS strain. 69734