Strain Report - Rat Genome Database

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Strain: ACI.BN-(D4Rat5-D4Got131)/Shul

Symbol: ACI.BN-(D4Rat5-D4Got131)/Shul
Strain: ACI.BN-(D4Rat5-D4Got131)
Substrain: Shul
RGD ID: 5688400
Citation ID: RRID:RGD_5688400
Ontology ID: RS:0003190
Also Known As: ACI.BN-(D4Rat5-D4Got131)/Shul
Type: congenic
Available Source: Not Available
Origination: Department of Oncology, McArdle Laboratory for Cancer Research, University of Wisconsin-Madison
Description: This congenic strain contains a region of BN/SsNHsd chromosome 4 transferred to the ACI/SegHsd strain background.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2414,118,904 - 158,261,065RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0410,728,623 - 157,981,900RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0410,720,881 - 224,994,372RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.449,638,281 - 162,284,199RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by Dr. James D. Shull's group Personal communication between Dr. James D. Shull's group and the RGD curators
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D4Rat5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2414,118,904 - 14,119,032 (+)MAPPER
Rnor_6.0410,728,623 - 10,728,750NCBI
Rnor_5.0410,720,881 - 10,721,008UniSTS
RGSC_v3.449,638,299 - 9,638,426UniSTS
RGSC_v3.449,638,281 - 9,638,829RGD
RGSC_v3.149,638,299 - 9,638,426RGD
Celera49,681,104 - 9,681,231UniSTS
RH 3.4 Map459.2RGD
RH 3.4 Map459.2UniSTS
RH 2.0 Map480.9RGD
SHRSP x BN Map45.5999RGD

Flank 2 / 1 (D4Got131)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24158,260,855 - 158,261,065 (+)MAPPER
Rnor_6.04157,981,691 - 157,981,900NCBI
Rnor_5.04224,994,163 - 224,994,372UniSTS
RGSC_v3.44162,283,989 - 162,284,199RGD
RGSC_v3.44162,283,990 - 162,284,199UniSTS
RGSC_v3.14162,528,926 - 162,529,135RGD
Celera4146,995,674 - 146,995,881UniSTS
RH 3.4 Map41005.5RGD
RH 3.4 Map41005.5UniSTS
Cytogenetic Map4q42UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-03-01 ACI.BN-(D4Rat5-D4Got131)/Shul    ACI.BN-(D4Rat5-D4Got131)/Shul    Name updated 68913 APPROVED