Strain Report - Rat Genome Database

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Strain: SS-Nppbem4Mcwi

Symbol: SS-Nppbem4Mcwi
Strain: SS-Nppbem4
Substrain: Mcwi
RGD ID: 5509988
Citation ID: RRID:RGD_5509988
Ontology ID: RS:0003006
Alleles: Nppbem4Mcwi
Previously known as: SS-Nppbem4Mcwi
Type: mutant
Source: PhysGen Knockouts
Origin: This strain was produced by injecting ZFNs targeting the sequence TTCCCAATTCGTCACAgaagctGCTGGAGCTGATAAG into SS/JrHsdMcwi rat embryos. The resulting mutation is a 138-bp deletion of part of intron 1 and exon 2.
Last Known Status: Cryopreserved Sperm (as of 2021-11-03)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25158,416,813 - 158,418,175RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.05164,796,176 - 164,797,538RGD_MAPPER_PIPELINERnor6.0
Rnor_5.05168,454,278 - 168,455,640RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.45165,062,348 - 165,063,650RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Identifying multiple causative genes at a single GWAS locus. Flister MJ, etal., Genome Res. 2013 Dec;23(12):1996-2002. doi: 10.1101/gr.160283.113. Epub 2013 Sep 4.
2. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
3. PhysGen Knockouts PhysGen Knockout strains
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-26 SS-Nppbem4Mcwi    SS-Nppbem4Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Nppbem4Mcwi    SS-Nppbem4Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Nppbem4Mcwi    SS-Nppbem4Mcwi    Name updated 68913 APPROVED
2014-03-26 SS-Nppbem4Mcwi    SS-Nppbem4Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Nppbem4Mcwi    SS-Nppbem4Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Nppbem4Mcwi    SS-Nppbem4Mcwi    Name updated 68913 APPROVED