Strain Report - Rat Genome Database

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Strain: SS-Plod1em1Mcwi

Symbol: SS-Plod1em1Mcwi
Strain: SS-Plod1em1
Substrain: Mcwi
RGD ID: 5131966
Citation ID: RRID:RGD_5131966
Ontology ID: RS:0002595
Alleles: Plod1em1Mcwi
Previously known as: SS-Plod1em1Mcwi
Type: mutant
Source: PhysGen Knockouts
Origin: This strain was produced by injecting ZFNs targeting the sequence CATCGCTGCCGAATCttccagAACCTGGATGGAGCCTTG into SS/JrHsdMcwi rat embryos. The resulting mutation is a 10-bp frameshift deletion in exon 4.
Last Known Status: Cryorecovery (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25158,340,674 - 158,367,581RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.05164,720,629 - 164,747,071RGD_MAPPER_PIPELINERnor6.0
Rnor_5.05168,379,092 - 168,405,534RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.45164,987,252 - 165,012,581RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Identifying multiple causative genes at a single GWAS locus. Flister MJ, etal., Genome Res. 2013 Dec;23(12):1996-2002. doi: 10.1101/gr.160283.113. Epub 2013 Sep 4.
2. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
3. PhysGen Knockouts PhysGen Knockout strains
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-26 SS-Plod1em1Mcwi    SS-Plod1em1Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Plod1em1Mcwi    SS-Plod1em1Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Plod1em1Mcwi    SS-Plod1em1Mcwi    Name updated 68913 APPROVED
2014-03-26 SS-Plod1em1Mcwi    SS-Plod1em1Mcwi    Name updated 68913 APPROVED
2013-08-13 SS-Plod1em1Mcwi    SS-Plod1em1Mcwi    Name updated 68913 APPROVED
2013-08-13 SS-Plod1em1Mcwi    SS-Plod1em1Mcwi    Name updated 68913 APPROVED