Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS-Cdh13em1Mcwi

Symbol: SS-Cdh13em1Mcwi
Strain: SS-Cdh13em1
Substrain: Mcwi
RGD ID: 5131922
Citation ID: RRID:RGD_5131922
Ontology ID: RS:0002583
Alleles: Cdh13em1Mcwi
Previously known as: SS-Cdh13em1Mcwi
Type: mutant
Source: PhysGen Knockouts
Origin: This strain was produced by injecting ZFNs targeting the sequence CTCACCCTGTGCGTCctgctgTCCCAGGTAGGGAATG into SS/JrHsdMcwi rat embryos. The resulting mutation is an 8-bp frameshift deletion in exon 1.
Last Known Status: Cryopreserved Sperm (as of 2021-11-03)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21946,349,562 - 47,387,462RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01950,848,793 - 51,971,618RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01961,621,434 - 62,720,155RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41948,507,173 - 49,575,123RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. Cdh13 and AdipoQ gene knockout alter instrumental and Pavlovian drug conditioning. King CP, etal., Genes Brain Behav. 2017 Sep;16(7):686-698. doi: 10.1111/gbb.12382. Epub 2017 May 2.
3. PhysGen Knockouts PhysGen Knockout strains
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-25 SS-Cdh13em1Mcwi    SS-Cdh13em1Mcwi    Name updated 68913 APPROVED
2014-03-25 SS-Cdh13em1Mcwi    SS-Cdh13em1Mcwi    Symbol updated 68687 APPROVED
2014-03-25 SS-Cdh13em1Mcwi    SS-Cdh13em1Mcwi    Name updated 68913 APPROVED
2014-03-25 SS-Cdh13em1Mcwi    SS-Cdh13em1Mcwi    Symbol updated 68687 APPROVED
2013-08-13 SS-Cdh13em1Mcwi    SS-Cdh13em1Mcwi    Name updated 68913 APPROVED