Strain Report - Rat Genome Database

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Strain: WF.WKY-(D5Rat26-D5Uwm42)/Uwm

Symbol: WF.WKY-(D5Rat26-D5Uwm42)/Uwm
Strain: WF.WKY-(D5Rat26-D5Uwm42)
Substrain: Uwm
RGD ID: 4892563
Citation ID: RRID:RGD_4892563
Ontology ID: RS:0002541
Also Known As: WF.WKY-(D5Rat26-D5Uwm42)/Uwm; line D
Type: congenic
Available Source: Not Available
Origination: University of Wisconsin-Madison
Description: WKY/NHsd rats were mated with WF/NHsd and the progeny was backcrossed to WF for 8-9 generations, selecting for Mcs5 region.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25113,558,156 - 146,996,127RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.05117,554,114 - 153,097,789RGD_MAPPER_PIPELINERnor6.0
Rnor_5.05121,495,621 - 156,871,691RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.45119,332,868 - 153,554,465RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "WF.WKY-(D5Rat26-D5Uwm42)/Uwm" (RS:0002541)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
Disease Annotations     Click to see Annotation Detail View


Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mammary tumor number

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Physical evidence of Mcs5, a QTL controlling mammary carcinoma susceptibility, in congenic rats. Samuelson DJ, etal., Carcinogenesis 2003 Sep;24(9):1455-60. Epub 2003 Jul 04.

Region

Position Markers

Flank 1 / 1 (D5Rat26)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25113,558,156 - 113,558,310 (+)MAPPER
Rnor_6.05117,554,114 - 117,554,267NCBI
Rnor_5.05121,495,621 - 121,495,774UniSTS
RGSC_v3.45119,333,064 - 119,333,217UniSTS
RGSC_v3.45119,332,868 - 119,333,229RGD
RGSC_v3.15119,338,290 - 119,338,443RGD
Celera5112,120,988 - 112,121,159UniSTS
RH 3.4 Map5795.0RGD
RH 3.4 Map5795.0UniSTS
SHRSP x BN Map561.5499UniSTS
SHRSP x BN Map561.5499RGD
FHH x ACI Map558.41RGD

Flank 2 / 1 (D5Uwm42)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25146,995,919 - 146,996,127 (+)MAPPER
Rnor_6.05153,097,582 - 153,097,789NCBI
Rnor_5.05156,871,484 - 156,871,691UniSTS
RGSC_v3.45153,554,257 - 153,554,465RGD
RGSC_v3.45153,554,258 - 153,554,465UniSTS
RGSC_v3.15153,564,296 - 153,564,504RGD
Celera5145,407,741 - 145,407,948UniSTS
Cytogenetic Map5 RGD

Additional Information