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Symbol:

SHRSP.SHR-(D18Rat73-D18Rat8)/Izm

Strain:

SHRSP.SHR-(D18Rat73-D18Rat8)

Substrain:

Izm

RGD ID:

38599201

Citation ID:

RRID:RGD_38599201

Ontology ID:

RS:0004827

Also Known As:

SPrch18.5; NBRP Rat No: 0831; SHRSP.SHR-(D18Rat73-D18Rat8)/Izm

Type:

congenic

Available Source:

National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.

Origination:

National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.

Description:

A congenic strain made by introducing a segments of chromosome 18 from SHR/Izm into SHRSP/Izm.

Coat Color:

white

Last Known Status:

Cryopreserved Sperm (as of 2020-09-15)

Research Usage

Hypertension and cerebral apoplexy

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	18	52,198,059 - 71,415,821	RGD_MAPPER_PIPELINE
mRatBN7.2	18	49,999,958 - 69,140,759	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	18	51,609,032 - 71,692,768	RGD_MAPPER_PIPELINE	Rnor_6.0
Rnor_5.0	18	50,804,228 - 70,825,941	RGD_MAPPER_PIPELINE	Rnor_5.0
RGSC_v3.4	18	52,290,789 - 72,450,442	RGD_MAPPER_PIPELINE	RGSC_v3.4

References

References - curated

#	Reference Title	Reference Citation
1.	Strains registered by the National Bio Resource Project for the Rat in Japan	Personal Communication with NBRP

Region

Position Markers

Flank 1 / 1 (D18Rat73)

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	52,198,059 - 52,198,268 (+)	Marker Load Pipeline
mRatBN7.2	18	49,999,958 - 50,000,167 (+)	MAPPER
Rnor_6.0	18	51,609,032 - 51,609,240	NCBI
Rnor_5.0	18	50,804,228 - 50,804,436	UniSTS
RGSC_v3.4	18	52,290,789 - 52,291,194	RGD
RGSC_v3.4	18	52,290,924 - 52,291,132	UniSTS
Celera	18	48,145,282 - 48,145,490	UniSTS
RGSC_v3.1	18	52,336,284 - 52,336,689	RGD
SHRSP x BN Map	18	19.1999	RGD
SHRSP x BN Map	18	19.1999	UniSTS

Flank 2 / 1 (D18Rat8)

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	71,415,654 - 71,415,821 (+)	Marker Load Pipeline
mRatBN7.2	18	69,140,592 - 69,140,759 (+)	MAPPER
Rnor_6.0	18	71,692,606 - 71,692,768	NCBI
Rnor_6.0	18	71,569,072 - 71,569,234	NCBI
Rnor_5.0	18	70,703,259 - 70,703,421	UniSTS
Rnor_5.0	18	70,825,779 - 70,825,941	UniSTS
RGSC_v3.4	18	72,450,108 - 72,450,442	RGD
RGSC_v3.4	18	72,450,121 - 72,450,283	UniSTS
Celera	18	67,306,327 - 67,306,489	UniSTS
RGSC_v3.1	18	72,523,394 - 72,523,556	RGD
RH 3.4 Map	18	715.7	RGD
RH 3.4 Map	18	715.7	UniSTS
RH 2.0 Map	18	194.3	RGD
SHRSP x BN Map	18	43.2499	RGD
FHH x ACI Map	18	51.87	RGD
Cytogenetic Map	18	q12.3	UniSTS

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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