Strain Report - Rat Genome Database

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Strain: SS.LEW-(D16Chm36-D16Mit2)/Ayd

Symbol: SS.LEW-(D16Chm36-D16Mit2)/Ayd
Strain: SS.LEW-(D16Chm36-D16Mit2)
Substrain: Ayd
RGD ID: 2325801
Citation ID: RRID:RGD_2325801
Ontology ID: RS:0002418
Also Known As: SS.LEW-(D16Chm36-D16Mit2)/Ayd; DSS.LEW-(D16Chm36-D16Mit2)/Lt; C16S.L6
Type: congenic
Available Source: Not Available
Origination: Research Centre, Centre Hospitalier de l'Universite de Monteal (CHUM), Quebec, Canada
Description: A sub congenic strain derived from the progenitor strain SS.LEW-(D16Rat12-D16Chm23)/Ayd
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.216903,314 - 4,227,730RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0161,619,835 - 5,098,704RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0161,604,056 - 5,038,806RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.416890,512 - 4,304,517RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Genetics of systolic and diastolic heart failure. Deng AY J Hypertens. 2015 Jan;33(1):3-13. doi: 10.1097/HJH.0000000000000400.
2. Distinct genomic replacements from Lewis correct diastolic dysfunction, attenuate hypertension, and reduce left ventricular hypertrophy in Dahl salt-sensitive rats. Deng AY, etal., J Hypertens. 2008 Oct;26(10):1935-1943.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D16Chm36)
Rat AssemblyChrPosition (strand)Source
mRatBN7.216903,314 - 903,530 (+)MAPPER
Rnor_6.0161,619,835 - 1,620,050NCBI
Rnor_5.0161,604,056 - 1,604,271UniSTS
RGSC_v3.416890,512 - 890,727UniSTS
Celera16882,204 - 882,419UniSTS
Cytogenetic Map16 RGD

Flank 2 / 1 (D16Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2164,227,609 - 4,227,730 (+)MAPPER
Rnor_6.0165,098,584 - 5,098,704NCBI
Rnor_6.0165,013,802 - 5,013,922NCBI
Rnor_5.0164,954,192 - 4,954,312UniSTS
Rnor_5.0165,038,686 - 5,038,806UniSTS
RGSC_v3.4164,304,396 - 4,304,517RGD
RGSC_v3.4164,304,397 - 4,304,517UniSTS
RGSC_v3.1164,304,394 - 4,304,515RGD
Celera1610,945,533 - 10,945,653UniSTS
RH 3.4 Map168.3RGD
RH 3.4 Map168.3UniSTS
SHRSP x BN Map161.1599UniSTS
SHRSP x BN Map161.1599RGD
FHH x ACI Map163.1999RGD
Cytogenetic Map16p16UniSTS
Strain QTL Data
Symbol Name Trait
Bp347 Blood pressure QTL 347 arterial blood pressure trait   (VT:2000000)    

Additional Information