Strain Report - Rat Genome Database

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Strain: PVG.LEW-(D1Rat270-D1Rat68)/Kini

Symbol: PVG.LEW-(D1Rat270-D1Rat68)/Kini
Strain: PVG.LEW-(D1Rat270-D1Rat68)
Substrain: Kini
RGD ID: 2325724
Citation ID: RRID:RGD_2325724
Ontology ID: RS:0002410
Also Known As: PVG.LEW-(D1Rat270-D1Rat68)/Kini; PVG.LEW congenic
Type: congenic
Available Source: Not Available
Origination: Center for Molecular Medicine, Neuroimmunology Unit, Karolinska Institutet, Stockholm, Sweden
Description: 63-Mb fragment was selectively transferred from LEW.1AV1 to PVG.1AV1
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21128,593,600 - 188,377,506RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01135,611,773 - 205,603,226RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01136,616,460 - 212,591,221RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41130,290,073 - 193,070,197RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. RGMA and IL21R show association with experimental inflammation and multiple sclerosis. Nohra R, etal., Genes Immun. 2010 Jun;11(4):279-93. Epub 2010 Jan 14.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D1Rat270)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21128,593,600 - 128,593,844 (+)MAPPER
Rnor_6.01135,611,773 - 135,612,014NCBI
Rnor_5.01136,616,460 - 136,616,701UniSTS
RGSC_v3.41130,290,073 - 130,290,315RGD
RGSC_v3.41130,290,074 - 130,290,315UniSTS
RGSC_v3.11130,368,329 - 130,368,661RGD
Celera1120,707,723 - 120,707,964UniSTS
SHRSP x BN Map165.4299RGD
SHRSP x BN Map165.4299UniSTS

Flank 2 / 1 (D1Rat68)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21188,377,360 - 188,377,506 (+)MAPPER
Rnor_6.01205,603,081 - 205,603,226NCBI
Rnor_5.01212,591,076 - 212,591,221UniSTS
RGSC_v3.41193,069,836 - 193,070,197RGD
RGSC_v3.41193,070,039 - 193,070,184UniSTS
RGSC_v3.11193,219,920 - 193,220,065RGD
Celera1186,117,126 - 186,117,271UniSTS
RH 3.4 Map11433.4UniSTS
RH 3.4 Map11433.4RGD
RH 2.0 Map11014.7RGD
SHRSP x BN Map197.04RGD
FHH x ACI Map191.06RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Has a higher mortality rate, higher incidence, more severe inflammation and multiple sclerosis along with higher TNF and IL-6 as compared to parental PVG.1AV1 2324646