Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini

Symbol: DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini
Strain: DA.PVG.1AV1-(D4Rat231-D4Mit12)
Substrain: Kini
RGD ID: 2317598
Citation ID: RRID:RGD_2317598
Ontology ID: RS:0002388
Previously known as: R13; DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini
Type: congenic
Source: Center for Molecular Medicine, Neuroimmunology Unit, Karolinska Institutet, Stockholm, Sweden
Origin: Congenic substrain established by intercrossing DA.PVG.1AV1-(D4Rat155-Spr) with parental DA/Kini
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2488,656,681 - 103,194,984RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0489,777,552 - 99,067,150RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04154,593,964 - 163,844,298RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4488,462,327 - 104,416,171RGD_MAPPER_PIPELINERGSC3.4





References

References - curated
# Reference Title Reference Citation
1. Multiple loci comprising immune-related genes regulate experimental neuroinflammation. Marta M, etal., Genes Immun. 2010 Jan;11(1):21-36. Epub 2009 Aug 13.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D4Rat231)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2488,656,681 - 88,656,903 (+)MAPPER
Rnor_6.0489,777,552 - 89,777,772NCBI
Rnor_5.04154,593,964 - 154,594,184UniSTS
RGSC_v3.4488,462,327 - 88,462,549RGD
RGSC_v3.4488,462,328 - 88,462,549UniSTS
RGSC_v3.1488,706,752 - 88,706,974RGD
SHRSP x BN Map443.1UniSTS
SHRSP x BN Map443.1RGD
FHH x ACI Map454.64RGD

Flank 2 / 1 (D4Mit12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24103,194,805 - 103,194,984 (+)MAPPER
Rnor_6.0499,066,972 - 99,067,150NCBI
Rnor_5.04163,844,120 - 163,844,298UniSTS
RGSC_v3.44104,415,992 - 104,416,171RGD
RGSC_v3.44104,415,993 - 104,416,171UniSTS
RGSC_v3.14104,660,473 - 104,660,652RGD
Celera492,370,739 - 92,370,917UniSTS
SHRSP x BN Map448.75UniSTS
SHRSP x BN Map448.75RGD
FHH x ACI Map460.18RGD
Cytogenetic Map4q32UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini    DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini    Name updated 68913 APPROVED
2013-08-28 DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini    DA.PVG.1AV1-(D4Rat231-D4Mit12)/Kini    Name updated 68913 APPROVED