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General

Strain: SBH.SBN-(D1Wox11-D1Rat137)/Ygl

Symbol:

SBH.SBN-(D1Wox11-D1Rat137)/Ygl

Strain:

SBH.SBN-(D1Wox11-D1Rat137)

Substrain:

Ygl

RGD ID:

2314501

Citation ID:

RRID:RGD_2314501

Ontology ID:

RS:0002114

Also Known As:

SBH.SBN-(D1Wox11-D1Rat137)Ygl;SBH/y.SBN/y-(D1Wox11-D1Rat137);Y^SBH/y;YSBH/y;Line 2; SBH.SBN-(D1Wox11-D1Rat137)/Ygl

Type:

congenic

Available Source:

Not Available

Origination:

Ben Gurion University Barzilai Medical Center, Ashkelon, Israel

Description:

Segment of interest from chr 1 of SBN/Ygl was introgressed onto the genetic background of SBH/Ygl this was done by crossing male SBH/Ygl with female SBN/Ygl fixing the Y chr to SBN/Ygl

Last Known Status:

Unknown

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	65,832,929 - 90,532,583	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	1	64,407,177 - 94,225,616	RGD_MAPPER_PIPELINE	Rnor_6.0
Rnor_5.0	1	63,399,232 - 95,326,185	RGD_MAPPER_PIPELINE	Rnor_5.0
RGSC_v3.4	1	64,145,811 - 90,306,478	RGD_MAPPER_PIPELINE	RGSC_v3.4

Annotation Click to see Annotation Detail View

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased systemic arterial systolic blood pressure (IMP)

Phenotype Values via PhenoMiner Click to see Annotation Detail View

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Clinical Measurement

systolic blood pressure

References

References - curated

#	Reference Title	Reference Citation
1.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines
2.	Congenic strains confirm the presence of salt-sensitivity QTLs on chromosome 1 in the Sabra rat model of hypertension.	Yagil C, etal., Physiol Genomics 2003 Jan 15;12(2):85-95.

Region

Position Markers

Flank 1 / 1 (D1Wox11)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	1	65,832,929 - 65,833,076 (+)	MAPPER
Rnor_6.0	1	64,407,177 - 64,407,321	NCBI
Rnor_5.0	1	63,399,232 - 63,399,376	UniSTS
RGSC_v3.4	1	64,145,812 - 64,145,956	UniSTS
RGSC_v3.4	1	64,145,811 - 64,145,956	RGD
Celera	1	63,557,744 - 63,557,888	UniSTS
RGSC_v3.1	1	64,223,922 - 64,224,067	RGD
RH 3.4 Map	1	739.8	UniSTS
RH 3.4 Map	1	739.8	RGD
RH 2.0 Map	1	473.2	RGD
Cytogenetic Map	1	q12	UniSTS

Flank 2 / 1 (D1Rat137)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	1	90,532,338 - 90,532,583 (+)	MAPPER
Rnor_6.0	1	94,225,372 - 94,225,616	NCBI
Rnor_5.0	1	95,325,941 - 95,326,185	UniSTS
RGSC_v3.4	1	90,306,033 - 90,306,478	RGD
RGSC_v3.4	1	90,306,035 - 90,306,279	UniSTS
Celera	1	84,867,135 - 84,867,379	UniSTS
RGSC_v3.1	1	90,384,146 - 90,384,390	RGD
RH 3.4 Map	1	886.1	RGD
RH 3.4 Map	1	886.1	UniSTS
RH 2.0 Map	1	582.2	RGD
SHRSP x BN Map	1	45.6999	RGD
FHH x ACI Map	1	48.9499	RGD

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: SBH.SBN-(D1Wox11-D1Rat137)/Ygl

Mammalian Phenotype

Related Phenotype Data for Term "SBH.SBN-(D1Wox11-D1Rat137)/Ygl" (RS:0002114)