Strain Report - Rat Genome Database

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Strain: SBH.SBN-(D1Rat137-D1Rat123)/Ygl

Symbol: SBH.SBN-(D1Rat137-D1Rat123)/Ygl
Strain: SBH.SBN-(D1Rat137-D1Rat123)
Substrain: Ygl
RGD ID: 2314494
Citation ID: RRID:RGD_2314494
Ontology ID: RS:0002112
Also Known As: SBH.SBN-(D1Rat137-D1Rat123)Ygl;SBH/y.SBN/y-(D1Rat137-D1Rat123);YSBH/y;YSBH/y;Line 4; SBH.SBN-(D1Rat137-D1Rat123)/Ygl
Type: congenic
Available Source: Not Available
Origination: Ben Gurion University Barzilai Medical Center, Ashkelon, Israel
Description: Segment of interest from chr 1 of SBN/Ygl was introgressed onto the genetic background of SBH/Ygl this was done by crossing male SBH/Ygl with female SBN/Ygl fixing the Y chr to SBN/Ygl
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2190,532,338 - 218,108,781RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0194,225,372 - 238,220,385RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0195,325,941 - 245,519,018RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4190,306,033 - 223,729,371RGD_MAPPER_PIPELINERGSC3.4





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Mammalian Phenotype

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Clinical Measurement
systolic blood pressure

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Congenic strains confirm the presence of salt-sensitivity QTLs on chromosome 1 in the Sabra rat model of hypertension. Yagil C, etal., Physiol Genomics 2003 Jan 15;12(2):85-95.

Region

Position Markers

Flank 1 / 1 (D1Rat137)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2190,532,338 - 90,532,583 (+)MAPPER
Rnor_6.0194,225,372 - 94,225,616NCBI
Rnor_5.0195,325,941 - 95,326,185UniSTS
RGSC_v3.4190,306,033 - 90,306,478RGD
RGSC_v3.4190,306,035 - 90,306,279UniSTS
RGSC_v3.1190,384,146 - 90,384,390RGD
Celera184,867,135 - 84,867,379UniSTS
RH 3.4 Map1886.1UniSTS
RH 3.4 Map1886.1RGD
RH 2.0 Map1582.2RGD
SHRSP x BN Map145.6999RGD
FHH x ACI Map148.9499RGD

Flank 2 / 1 (D1Rat123)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21218,108,584 - 218,108,781 (+)MAPPER
Rnor_6.01238,220,189 - 238,220,385NCBI
Rnor_5.01245,518,822 - 245,519,018UniSTS
RGSC_v3.41223,729,175 - 223,729,371UniSTS
RGSC_v3.41223,729,174 - 223,729,371RGD
RGSC_v3.11223,893,198 - 223,893,394RGD
Celera1215,376,705 - 215,376,901UniSTS
RH 3.4 Map9757.8RGD
RH 3.4 Map9757.8UniSTS
SHRSP x BN Map1116.5799UniSTS
SHRSP x BN Map1116.5799RGD
FHH x ACI Map1106.87RGD

Additional Information