Strain Report - Rat Genome Database

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Strain: SS.SR-(D7Mco19-D7Mco7)/Jr

Symbol: SS.SR-(D7Mco19-D7Mco7)/Jr
Strain: SS.SR-(D7Mco19-D7Mco7)
Substrain: Jr
RGD ID: 2306816
Citation ID: RRID:RGD_2306816
Ontology ID: RS:0002208
Also Known As: S.R(11Bx4x4); SS.SR-(D7Mco19-D7Mco7)/Jr; SS.SR-(D7Mco19-Exon2-Cyp11b1)/Jr; SS.SR-(D7Mco19-Exon2-Cyp11b1)/Jr; SS.SR-(D7Mco19-D7Mco7)/Jr
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: Congenic substrain developed by crossing SS.SR-(D7Uia1-D7Mco7)/Jr to SS/Jr to produce F1 which were intercrossed and genotyped
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27106,571,501 - 106,571,759RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.07115,922,628 - 115,922,885RGD_MAPPER_PIPELINERnor6.0
Rnor_5.07115,828,017 - 116,100,169RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.47112,800,232 - 113,014,423RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Epistatic genetic determinants of blood pressure and mortality in a salt-sensitive hypertension model. Cicila GT, etal., Hypertension. 2009 Apr;53(4):725-32. Epub 2009 Mar 2.
2. Defining the blood pressure QTL on Chromosome 7 in Dahl rats by a 177-kb congenic segment containing Cyp11b1. Garrett MR and Rapp JP, Mamm Genome 2003 Apr;14(4):268-73.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D7Mco19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.27106,571,501 - 106,571,759 (+)MAPPER
Rnor_6.07115,922,628 - 115,922,885NCBI
Rnor_5.07115,828,017 - 115,828,274UniSTS
RGSC_v3.47112,800,232 - 112,800,489UniSTS
Celera7102,972,618 - 102,972,875UniSTS
Cytogenetic Map7 RGD

Flank 2 / 1 (D7Mco7)
Rat AssemblyChrPosition (strand)Source
Rnor_5.07116,059,683 - 116,060,096NCBI
Rnor_5.07116,059,684 - 116,060,096NCBI
Rnor_5.07116,099,756 - 116,100,169NCBI
RGSC_v3.47112,979,257 - 112,979,667UniSTS
RGSC_v3.47112,979,256 - 112,979,667RGD
RGSC_v3.47113,014,011 - 113,014,423RGD
RGSC_v3.17113,048,241 - 113,048,653RGD
Cytogenetic Map7q34UniSTS
Strain QTL Data
Symbol Name Trait
Bp335 Blood pressure QTL 335 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other lower end of this strain is defined by crossover which occurred between exon 2 and 7 of the Cyp11b1 gene 629613

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.SR-(D7Mco19-D7Mco7)/Jr    SS.SR-(D7Mco19-D7Mco7)/Jr    Name updated 68913 APPROVED
2013-08-28 SS.SR-(D7Mco19-D7Mco7)/Jr    SS.SR-(D7Mco19-D7Mco7)/Jr    Name updated 68913 APPROVED