Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: BBDR.BBDP-(D4Rhw11-D4Rhw10)/Rhw

Symbol: BBDR.BBDP-(D4Rhw11-D4Rhw10)/Rhw
Strain: BBDR.BBDP-(D4Rhw11-D4Rhw10)
Substrain: Rhw
RGD ID: 2306529
Citation ID: RRID:RGD_2306529
Ontology ID: RS:0001772
Previously known as: BBDR.BBDP-(D4Rhw11-D4Rhw10)/Rhw;DR.lyp/lyp;DR.lyp/lyp; BBDR.BBDP-(D4Rhw11-D4Rhw10)/Rhw
Type: congenic
Source: Department of Medicine, University of Washington, Seattle, Washington
Origin: Parental strain BBDR.BBDP-(D4Rhw17-ss99306861)(D4Rhw11-D4Rhw10)/Rhw were backcrossed to BBDR/Rhw, carefully DNA between D4Rhw17-ss99306861 was removed giving the desired congenic
Inbred Generations: F5
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2476,721,312 - 78,654,798RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0477,380,565 - 79,326,833RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04142,052,025 - 144,005,977RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4475,808,584 - 77,809,321RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References - curated
# Reference Title Reference Citation
1. Introgression of F344 Rat Genomic DNA on BB Rat Chromosome 4 Generates Diabetes-Resistant Lymphopenic BB Rats. Fuller JM, etal., Diabetes. 2006 Dec;55(12):3351-7.
2. Genetic Dissection Reveals Diabetes Loci Proximal to the Gimap5 Lymphopenia Gene. Fuller JM, etal., Physiol Genomics. 2009 Apr 7.
3. BB rat Gimap gene expression in sorted lymphoid T and B cells. Moralejo DH, etal., Life Sci. 2011 Nov 7;89(19-20):748-54. Epub 2011 Sep 10.
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines
5. Sequence variation and expression of the Gimap gene family in the BB rat. Rutledge EA, etal., Exp Diabetes Res. 2009;2009:835650. Epub 2009 May 3.


Position Markers

Flank 1 / 1 (D4Rhw11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2476,721,312 - 76,721,521 (+)MAPPER
Rnor_6.0477,380,565 - 77,380,773NCBI
Rnor_5.04142,052,025 - 142,052,233UniSTS
RGSC_v3.4475,808,584 - 75,808,792UniSTS
Celera471,525,933 - 71,526,133UniSTS
Cytogenetic Map4q24RGD

Flank 2 / 1 (D4Rhw10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2478,654,527 - 78,654,798 (+)MAPPER
Rnor_6.0479,326,563 - 79,326,833NCBI
Rnor_5.04144,005,707 - 144,005,977UniSTS
RGSC_v3.4477,809,051 - 77,809,321UniSTS
Celera473,568,949 - 73,569,219UniSTS
Cytogenetic Map4q24RGD

Additional Information