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Strain Registration

Strain: ACI.F344-(D16Rat12-D16Mco2)/Nkg

Symbol: ACI.F344-(D16Rat12-D16Mco2)/Nkg
Strain: ACI.F344-(D16Rat12-D16Mco2)
Substrain: Nkg
RGD ID: 2305977
Citation ID: RRID:RGD_2305977
Ontology ID: RS:0001755
Also Known As: ACI.F344-(D16Rat12-D16Mco2)/Nkg; NBRP Rat No: 0401; ACI.F344-(D16Rat12-D16Mco2)/Nkg
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: F344 rats are susceptible and ACI rats are resistant to PhIP (2-Amino-1-methyl-6-phenylimidazo[4,5-b]pyridine)-induced ACF (aberrant crypt foci) formation (Nagao, 1998). This congenic strain was established using 'speed congenic' method by backcrossing (F344/JclxACI/NJcl)F1 onto ACI/NJcl, followed by intercrossing in N8 generation. Thereafter this strain is maintained by crossing homozygous individuals.
Coat Color: Agouti
Inbred Generations: F9
Last Known Status: Cryopreserved Embryo; Cryopreserved Sperm
Research Usage Cancer
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.216380,245 - 380,356RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0161,090,054 - 1,090,164RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0161,084,304 - 67,099,528RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.416350,121 - 67,547,357RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D16Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.216380,245 - 380,356 (+)MAPPER
Rnor_6.0161,090,054 - 1,090,164NCBI
Rnor_5.0161,084,304 - 1,084,414UniSTS
RGSC_v3.416350,121 - 350,232RGD
RGSC_v3.416350,122 - 350,232UniSTS
RGSC_v3.116350,122 - 350,232RGD
RH 3.4 Map1616.3UniSTS
RH 3.4 Map1616.3RGD
RH 2.0 Map160.0RGD
SHRSP x BN Map160.04RGD
FHH x ACI Map161.9899RGD

Flank 2 / 1 (D16Mco2)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01667,099,349 - 67,099,528NCBI
RGSC_v3.41667,547,179 - 67,547,357RGD
RGSC_v3.11667,547,385 - 67,547,563RGD
Cytogenetic Map16 RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-17 ACI.F344-(D16Rat12-D16Mco2)/Nkg    ACI.F344-(D16Rat12-D16Mco2)/Nkg    Name updated 68913 APPROVED
2012-05-17 ACI.F344-(D16Rat12-D16Mco2)/Nkg    ACI.F344-(D16Rat12-D16Mco2)/Nkg    Name updated 68913 APPROVED