Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: F344.OLETF-(D14Rat143-D14Rat12)/Tj

Symbol: F344.OLETF-(D14Rat143-D14Rat12)/Tj
Strain: F344.OLETF-(D14Rat143-D14Rat12)
Substrain: Tj
RGD ID: 2304058
Citation ID: RRID:RGD_2304058
Ontology ID: RS:0001942
Previously known as: F344.OLETF-(D14Rat143-D14Rat12)/Tj; F.O-Nidd2/rat143.of; F.O-Nidd2/rat143.of; NBRP Rat No: 0190; F344.OLETF-(D14Rat143-D14Rat12)/Tj
Type: congenic
Source: National BioResource Project for the Rat in Japan
Origin: Established as speed congenics (5 generations, microsatellite marker) at the University of Tokushima School of Medicine, Institute for Animal Experimentation in 1998. Afterwards, maintained by sib mating.
Inbred Generations: F1
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21418,212,584 - 39,153,750RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01419,847,829 - 61,783,215RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01419,754,557 - 61,886,417RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41419,738,306 - 41,707,592RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D14Rat143)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21418,212,584 - 18,212,709 (+)MAPPER
Rnor_6.01419,847,829 - 19,847,953NCBI
Rnor_5.01419,754,557 - 19,754,681UniSTS
RGSC_v3.41419,738,306 - 19,738,431RGD
RGSC_v3.41419,738,307 - 19,738,431UniSTS
RGSC_v3.11419,738,307 - 19,738,431RGD
Celera1417,578,740 - 17,578,864UniSTS
RH 3.4 Map14249.0UniSTS
RH 3.4 Map14249.0RGD
FHH x ACI Map1419.4299UniSTS
FHH x ACI Map1419.4299RGD

Flank 2 / 1 (D14Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21439,153,581 - 39,153,750 (-)MAPPER
Rnor_6.01461,783,047 - 61,783,215NCBI
Rnor_5.01461,886,249 - 61,886,417UniSTS
RGSC_v3.41441,707,423 - 41,707,592RGD
RGSC_v3.41441,707,424 - 41,707,592UniSTS
RGSC_v3.11441,709,814 - 41,709,983RGD
Celera1438,346,383 - 38,346,551UniSTS
RH 2.0 Map14500.7RGD
SHRSP x BN Map1427.1799RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502