Strain Report - Rat Genome Database

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Strain: WKAH.LEC-Ptprkthid/Tj

Symbol: WKAH.LEC-Ptprkthid/Tj
Strain: WKAH.LEC-Ptprkthid
Substrain: Tj
RGD ID: 2303998
Citation ID: RRID:RGD_2303998
Ontology ID: RS:0002261
Also Known As: WKAH.LEC-Ptprkthid/Tj; WKAH.LEC-Ptprkthid/Tj; WKAH.LEC-Ptprk/Tj; NBRP Rat No: 0077; WKAH.C-thid; WKAH.C-thid; WKAH background LEC-derived thid Congenic; WKAH.LEC-Ptprkthid/Tj; WKAH.LEC-Ptprk^[thid]/Tj
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: A congenic strain produced by 8 generation backcrosses to WKAH strain in 1989.
Inbred Generations: F41
Last Known Status: Cryopreserved Embryo
Research Usage Cancer
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2116,738,896 - 17,236,687RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0117,445,052 - 18,058,266RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0118,602,550 - 19,574,958RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4117,328,563 - 17,752,200RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Development of functional rat-derived T cells in SCID mice engrafted with the fetal thymus of LEC rats which are defective in CD4+ T cells. Chai JG, etal., Microbiol Immunol 1996;40(9):659-64.
2. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (Ptprk)
Rat AssemblyChrPosition (strand)Source
GRCr8118,557,091 - 19,056,297 (-)NCBI
mRatBN7.2116,738,896 - 17,236,687 (-)NCBI
mRatBN7.2 Ensembl116,850,576 - 17,103,605 (-)Ensembl
UTH_Rnor_SHR_Utx116,509,656 - 17,007,437 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0122,511,543 - 23,009,344 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0116,710,255 - 17,208,405 (-)NCBI
Rnor_6.0117,445,052 - 18,058,266 (-)NCBI
Rnor_6.0 Ensembl117,446,417 - 18,058,055 (-)Ensembl
Rnor_5.0119,260,651 - 19,574,958 (-)NCBI
Rnor_5.0118,602,550 - 18,714,238 (-)NCBI
RGSC_v3.4117,328,563 - 17,752,200 (-)NCBI
RGSC_v3.1117,332,345 - 17,752,187 (-)NCBI
Celera115,151,226 - 15,646,653 (-)NCBI
Cytogenetic Map1p12NCBI

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-09 WKAH.LEC-Ptprkthid/Tj    WKAH.LEC-Ptprkthid/Tj    Name updated 68913 APPROVED
2012-05-09 WKAH.LEC-Ptprkthid/Tj    WKAH.LEC-Ptprkthid/Tj    Name updated 68913 APPROVED