Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: OLETF.F344-(D9Mgh8-D9Mit2)/Tj

Symbol: OLETF.F344-(D9Mgh8-D9Mit2)/Tj
Strain: OLETF.F344-(D9Mgh8-D9Mit2)
Substrain: Tj
RGD ID: 2303993
Citation ID: RRID:RGD_2303993
Ontology ID: RS:0002084
Previously known as: OLETF.F344-(D9Mgh8-D9Mit2)/Tj; O.F-Nidd8/F344; O.F-Nidd8/F344; O.F-Nidd8/F344; OLETF background F344 Congenic; OLETF.F344-(D9Mgh8-D9Mit2)/Tj
Type: congenic
Source: National BioResource Project for the Rat in Japan
Origin: Established as speed congenics (5 generations, microsatellite marker) at the University of Tokushima School of Medicine, Institute for Animal Experimentation in 1999. Afterwards, maintained by sib mating.
Inbred Generations: F6
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2936,840,385 - 66,437,242RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0941,139,089 - 71,771,476RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0940,808,491 - 70,797,404RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4933,374,546 - 63,705,951RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Mgh8)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2936,840,385 - 36,840,608 (+)MAPPER
Rnor_6.0941,139,089 - 41,139,311NCBI
Rnor_5.0940,808,491 - 40,808,713UniSTS
RGSC_v3.4933,374,546 - 33,374,769RGD
RGSC_v3.4933,374,547 - 33,374,769UniSTS
RGSC_v3.1933,375,961 - 33,376,183RGD
Celera934,625,350 - 34,625,572UniSTS
RH 3.4 Map9352.1UniSTS
RH 3.4 Map9352.1RGD
RH 2.0 Map9355.0RGD
Cytogenetic Map9q21UniSTS

Flank 2 / 1 (D9Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2966,437,052 - 66,437,242 (+)MAPPER
Rnor_6.0971,771,288 - 71,771,476NCBI
Rnor_5.0970,797,216 - 70,797,404UniSTS
RGSC_v3.4963,705,761 - 63,705,951RGD
RGSC_v3.4963,705,762 - 63,705,951UniSTS
RGSC_v3.1963,852,743 - 63,852,933RGD
Celera963,832,694 - 63,832,883UniSTS
RH 3.4 Map9588.2UniSTS
RH 3.4 Map9588.2RGD
RH 2.0 Map9632.5RGD
SHRSP x BN Map945.5498RGD
FHH x ACI Map942.29RGD
Cytogenetic Map9 RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-08 OLETF.F344-(D9Mgh8-D9Mit2)/Tj    OLETF.F344-(D9Mgh8-D9Mit2)/Tj    Name updated 68913 APPROVED
2012-05-08 OLETF.F344-(D9Mgh8-D9Mit2)/Tj    OLETF.F344-(D9Mgh8-D9Mit2)/Tj    Name updated 68913 APPROVED