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Strain Registration

Strain: SS.BN-(D13Rat7-D13Rat88)/Mcwi

Symbol: SS.BN-(D13Rat7-D13Rat88)/Mcwi
Strain: SS.BN-(D13Rat7-D13Rat88)
Substrain: Mcwi
RGD ID: 2302996
Citation ID: RRID:RGD_2302996
Ontology ID: RS:0001715
Also Known As: SS.BN-(D13Rat7-D13Rat20)/Mcwi; congenic line 2; congenic strain 2; congenic line 2;congenic strain 2; SS.BN-(D13Rat7-D13Rat20)/Mcwi;SS.BN-(D13Rat7-D13Rat88)/Mcwi; SS.BN-(D13Rat7-D13Rat88)/Mcwi
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: SS/JrHsdMcwi were crossed with SS-13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21311,766,535 - 37,262,232RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01314,279,081 - 42,155,682RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01319,518,130 - 47,267,192RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4131,084,268 - 38,329,229RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Multiple Blood Pressure loci on rat Chromosome 13 attenuate the development of hypertension in the Dahl S Hypertensive rat. Moreno C, etal., Physiol Genomics. 2007 Jun 12;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Rat7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21311,766,535 - 11,766,737 (+)MAPPER
Rnor_6.01314,279,081 - 14,279,282NCBI
Rnor_5.01319,518,130 - 19,518,331UniSTS
RGSC_v3.4131,084,269 - 1,084,470UniSTS
RGSC_v3.4131,084,268 - 1,084,470RGD
RGSC_v3.1131,084,268 - 1,084,470RGD
Celera1311,796,004 - 11,796,205UniSTS
SHRSP x BN Map131.1799UniSTS
SHRSP x BN Map131.1799RGD
FHH x ACI Map133.68RGD

Flank 2 / 1 (D13Rat20)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21337,262,092 - 37,262,232 (+)MAPPER
Rnor_6.01342,155,543 - 42,155,682NCBI
Rnor_5.01347,267,053 - 47,267,192UniSTS
RGSC_v3.41338,329,089 - 38,329,229RGD
RGSC_v3.41338,329,090 - 38,329,229UniSTS
RGSC_v3.11338,343,132 - 38,343,272RGD
Celera1337,065,270 - 37,065,412UniSTS
RH 2.0 Map13292.2RGD
SHRSP x BN Map138.0099RGD
FHH x ACI Map139.15RGD
Cytogenetic Map13q11UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Males had lower MAP as compared to SS/JrHsdMcwi on 8% NaCl diet after 2 weeks 1625678