Strain Report - Rat Genome Database

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Strain: SS.BN-(D13Rat88-D13Rat91)/Mcwi

Symbol: SS.BN-(D13Rat88-D13Rat91)/Mcwi
Strain: SS.BN-(D13Rat88-D13Rat91)
Substrain: Mcwi
RGD ID: 2302986
RRID: RGD_2302986
Ontology ID: N/A
Also known as: SS.BN-(D13Rat88-D13Rat91)/Mcwi; congenic line 9; congenic strain 9
Type: congenic
Source: Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: SS/JrHsdMcwi were crossed with SS-13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21341,184,022 - 45,417,941RGD_MAPPER_PIPELINE
Rnor_6.01346,444,570 - 50,799,665RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01351,509,286 - 55,853,202RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41342,627,610 - 46,912,163RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Moreno C, etal., Physiol Genomics. 2007 Jun 12;.

Region

Position Markers

Flank 1 / 1 (D13Rat88)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21341,184,022 - 41,184,251 (+)MAPPER
Rnor_6.01346,444,570 - 46,444,796NCBI
Rnor_5.01351,509,286 - 51,509,512UniSTS
RGSC_v3.41342,627,611 - 42,627,837UniSTS
RGSC_v3.41342,627,610 - 42,627,837RGD
RGSC_v3.11342,641,654 - 42,641,880RGD
Celera1341,544,260 - 41,544,488UniSTS
RH 3.4 Map13107.8UniSTS
RH 3.4 Map13107.8RGD
RH 2.0 Map13290.4RGD
SHRSP x BN Map1310.2099RGD
FHH x ACI Map1312.72RGD
Cytogenetic Map13q12-q13UniSTS

Flank 2 / 1 (D13Rat91)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21345,417,753 - 45,417,941 (+)MAPPER
Rnor_6.01350,799,478 - 50,799,665NCBI
Rnor_5.01355,853,015 - 55,853,202UniSTS
RGSC_v3.41346,911,975 - 46,912,163RGD
RGSC_v3.41346,911,976 - 46,912,163UniSTS
RGSC_v3.11346,926,019 - 46,926,206RGD
Celera1345,746,900 - 45,747,075UniSTS
RH 3.4 Map13172.5UniSTS
RH 3.4 Map13172.5RGD
RH 2.0 Map13381.9RGD
SHRSP x BN Map1314.7498RGD
FHH x ACI Map1317.13RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other Showed sexual dimorphism during the development of high blood pressure 1625678