Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Strain Registration

Strain: F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi

Symbol: F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi
Strain: F344-Tmtc2Tn(sb-T2/Bart3)2.276
Substrain: Mcwi
RGD ID: 2302655
Citation ID: RRID:RRRC_00376
Ontology ID: RS:0001699
Alleles: Tmtc2Tn(sb-T2/Bart3)2.276Mcwi
Also Known As: F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi; F344-Tmtc2^[Tn(sb-T2/Bart3)2.276Mcwi]
Type: mutant
Available Source: Rat Resource and Research Center
Origination: PhysGen, Transposagen
Description: These Sleeping Beauty mutants were derived by crossing F344-TgTn(T2/Bart3)2Ceb (RGD:2290163) and F344-Tg(PGK2-sb11)Ceb (RGD:2290169). This mutation consists of an insertion of a Sleeping Beauty transposable element gene trap construct into the 2nd intron of the Tmtc2 gene.
Last Known Status: Cryopreserved Sperm (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2740,392,377 - 40,806,685RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0747,179,596 - 47,586,777RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0747,197,110 - 47,603,261RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4743,667,983 - 44,133,854RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Generation of rat mutants using a coat color-tagged Sleeping Beauty transposon system. Lu B, etal., Mamm Genome. 2007 May;18(5):338-46. Epub 2007 Jun 8.
2. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
3. PhysGen Strains PhysGen strains
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-25 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    Name updated 68913 APPROVED
2014-03-25 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    Symbol updated 68687 APPROVED
2014-03-25 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    Name updated 68913 APPROVED
2014-03-25 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    Symbol updated 68687 APPROVED
2012-04-17 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    Name updated 68913 APPROVED
2012-04-17 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    Name updated 68913 APPROVED
2010-06-08 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276/Mcwi    Symbol updated 68687 APPROVED
2010-06-08 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276/Mcwi    Name updated 68913 APPROVED
2010-06-08 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276/Mcwi    Symbol updated 68687 APPROVED
2010-06-08 F344-Tmtc2Tn(sb-T2/Bart3)2.276Mcwi    F344-Tmtc2Tn(sb-T2/Bart3)2.276/Mcwi    Name updated 68913 APPROVED

Database Acc Id Source(s)
RRRC RRRC:00376 RGD