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Strain Registration

Strain: SHRSP.WKY-(Apbb1-D1Arb21)/Izm

Symbol: SHRSP.WKY-(Apbb1-D1Arb21)/Izm
Strain: SHRSP.WKY-(Apbb1-D1Arb21)
Substrain: Izm
RGD ID: 2302110
Citation ID: RRID:RGD_2302110
Ontology ID: RS:0001683
Previously known as: SHRSPwch1.8; SHRSP.WKY-(Apbb1-D1Arb21)/Izm;NBRP Rat No: 0229; SPwch1.8; SHRSP.WKY-(Apbb1-D1Arb21)/Izm
Type: congenic
Source: National BioResource Project for the Rat in Japan
Origin: SHRSP.WKY-(Klk1-D1Rat116)/Izm was backcrossed with SHRSP/Izm, resulting F1 were intercrossed to obtain F2 recombinant individuals were selected by marker assisted selection
Inbred Generations: F6
Last Known Status: Cryopreserved Embryo
Research Usage Cardio Hypertension
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21159,896,889 - 182,418,476RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01170,387,625 - 199,254,774RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01177,393,531 - 206,277,202RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41163,282,918 - 187,092,492RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Genetic effects of blood pressure quantitative trait Loci on hypertension-related organ damage: evaluation using multiple congenic strains. Ishikawa N, etal., Hypertens Res. 2008 Sep;31(9):1773-9.
2. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines
4. A 1.8-Mbp fragment on chromosome 1 affects sympathetic response to stress: evaluation in reciprocal congenic strains between stroke-prone spontaneously hypertensive rat and Wistar-Kyoto rat. Xiao B, etal., J Hypertens. 2010 Nov 8.

Region

Position Markers

Flank 2 / 1 (D1Arb21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21182,418,219 - 182,418,476 (+)MAPPER
Rnor_6.01199,254,518 - 199,254,774NCBI
Rnor_5.01206,276,946 - 206,277,202UniSTS
RGSC_v3.41187,092,235 - 187,092,492RGD
RGSC_v3.41187,092,236 - 187,092,492UniSTS
RGSC_v3.11187,242,116 - 187,242,373RGD
Celera1180,069,264 - 180,069,520UniSTS
FHH x ACI Map185.51UniSTS
FHH x ACI Map185.51RGD
Cytogenetic Map1q36UniSTS

Flank 1 / 1 (Apbb1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21159,896,889 - 159,920,505 (-)NCBI
mRatBN7.2 Ensembl1159,896,880 - 159,920,627 (-)Ensembl
UTH_Rnor_SHR_Utx1167,919,373 - 167,935,733 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01175,105,367 - 175,121,733 (-)NCBI
UTH_Rnor_WKY_Bbb_1.01168,007,191 - 168,023,554 (-)NCBI
Rnor_6.01170,387,625 - 170,411,263 (-)NCBI
Rnor_6.0 Ensembl1170,387,609 - 170,404,056 (-)Ensembl
Rnor_5.01177,393,531 - 177,417,140 (-)NCBI
RGSC_v3.41163,282,918 - 163,299,333 (-)NCBI
RGSC_v3.11163,378,394 - 163,394,810 (-)NCBI
Celera1157,829,568 - 157,845,995 (-)NCBI
Cytogenetic Map1q32NCBI

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-11 SHRSP.WKY-(Apbb1-D1Arb21)/Izm    SHRSP.WKY-(Apbb1-D1Arb21)/Izm    Name updated 68913 APPROVED