Strain Report - Rat Genome Database

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Strain: BN.GH-(D2Rat22-D2Mgh11)/Mcwi

Symbol: BN.GH-(D2Rat22-D2Mgh11)/Mcwi
Strain: BN.GH-(D2Rat22-D2Mgh11)
Substrain: Mcwi
RGD ID: 2301939
Citation ID: RRID:RGD_2301939
Ontology ID: RS:0001668
Also known as: BN.GH2;BN.GH-(D2Rat22-D2Mgh11)/Mcwi; BN.GH-(D2Rat22-D2Mgh11)/Mcwi
Type: congenic
Source: Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: Male GH/Omr were intercrossed with female BN/Elh then F1 male offspring was backcrossed to female BN/Elh, marker-assisted selection strategy was used to select the males who were backcrossed to BN for 10 generations
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2268,462,860 - 189,039,377RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0269,243,686 - 204,022,555RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0288,968,735 - 223,460,027RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4269,302,718 - 69,303,085RGD_MAPPER_PIPELINERGSC3.4





References

References - curated
1. Bilusic M, etal., Croat Med J. 2008 Oct;49(5):586-99.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat22)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2268,462,860 - 68,462,973 (+)MAPPER
Rnor_6.0269,243,686 - 69,243,798NCBI
Rnor_5.0288,968,735 - 88,968,847UniSTS
RGSC_v3.4269,302,718 - 69,303,085RGD
RGSC_v3.4269,302,723 - 69,302,835UniSTS
RGSC_v3.1269,230,956 - 69,231,068RGD
Celera264,332,321 - 64,332,433UniSTS
RH 3.4 Map2435.4UniSTS
RH 3.4 Map2435.4RGD
SHRSP x BN Map229.7798UniSTS
SHRSP x BN Map229.7798RGD

Flank 2 / 1 (D2Mgh11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22189,039,155 - 189,039,377 (+)MAPPER
Rnor_6.02204,022,334 - 204,022,555NCBI
Rnor_5.02223,459,806 - 223,460,027UniSTS
Celera2181,473,981 - 181,474,202UniSTS
RH 3.4 Map21294.1UniSTS
RH 3.4 Map21294.1RGD
RH 2.0 Map2967.0RGD
SHRSP x BN Map272.7598RGD
Cytogenetic Map2q34UniSTS

Additional Information