Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: LOU.BN-(D6Rat128-D6Rat115)/Ins

Symbol: LOU.BN-(D6Rat128-D6Rat115)/Ins
Strain: LOU.BN-(D6Rat128-D6Rat115)
Substrain: Ins
RGD ID: 2293832
Citation ID: RRID:RGD_2293832
Ontology ID: RS:0001369
Also Known As: LOU.BN-(D6Rat128-D6Rat115)/Ins;LOU.BN.D6Rat128/D6Rat115; LOU.BN-(D6Rat128-D6Rat115)/Ins
Type: congenic
Available Source: Not Available
Origination: INSERM, Paris, France
Description: segment of interest from chr 6 of BN/Rj was introgressed on LOU/Ins by performing 8 backcrosses followed by 1 intercross
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2673,691,999 - 111,838,254RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0677,111,071 - 116,576,287RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0686,645,162 - 125,802,733RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4676,613,351 - 116,550,459RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View
hydronephrosis  (IAGP)


References - curated
# Reference Title Reference Citation
1. Localization of genetic loci controlling hydronephrosis in the Brown Norway rat and its association with hematuria. Kota LT, etal., Physiol Genomics. 2008 Jun 3;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D6Rat128)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2673,691,999 - 73,692,206 (+)MAPPER
Rnor_6.0677,111,071 - 77,111,277NCBI
Rnor_5.0686,645,162 - 86,645,368UniSTS
RGSC_v3.4676,613,351 - 76,613,557RGD
RGSC_v3.4676,613,352 - 76,613,558UniSTS
RGSC_v3.1676,616,477 - 76,616,683RGD
Celera672,500,484 - 72,500,690UniSTS
RH 3.4 Map6527.3UniSTS
RH 3.4 Map6527.3RGD
SHRSP x BN Map648.8899UniSTS
SHRSP x BN Map648.8899RGD

Flank 2 / 1 (D6Rat115)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26111,837,996 - 111,838,254 (+)MAPPER
Rnor_6.06116,576,030 - 116,576,287NCBI
Rnor_5.06125,802,476 - 125,802,733UniSTS
RGSC_v3.46116,550,201 - 116,550,459RGD
RGSC_v3.46116,550,202 - 116,550,459UniSTS
RGSC_v3.16116,553,651 - 116,554,017RGD
Celera6109,546,819 - 109,547,094UniSTS
SHRSP x BN Map666.8998RGD
SHRSP x BN Map666.8998UniSTS

Additional Information