Strain Report - Rat Genome Database

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Strain: SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi

Symbol: SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi
Strain: SS.BN-(D13Hmgc64-RN34_13048990782)
Substrain: Mcwi
RGD ID: 2293145
RRID: RGD_2293145
Ontology ID: RS:0001486
Alleles: Ren
Also known as: SS.BN-(D13Rat123-D13Rat101)/Mcwi|\SS.BN-(D13rat123-D13Rat101)/Mcwi;line D; congenic line 9; congenic strain 9; SS.BN-(D13Rat88-D13Rat91)/Mcwi;SS.BN-(D13Rat88-D13Rat91)/Mcwi; SS.BN-(D13Rat123-D13Rat101)/Mcwi; SS.BN-(D13Hmgc41-D13Rat101)/Mcwi; SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi
Type: congenic
Source: Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: SS/JrHsdMcwi were crossed with SS-Chr 13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21343,763,752 - 43,763,948RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.21347,841,075 - 47,841,255RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01349,102,205 - 49,102,400RGD_MAPPER_PIPELINERnor6.0
Rnor_6.01353,264,698 - 53,264,877RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01358,314,588 - 58,314,767RGD_MAPPER_PIPELINERnor5.0
Rnor_5.01354,170,894 - 54,171,089RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41349,428,397 - 49,428,577RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.41348,990,782 - 48,990,782RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.41345,215,472 - 45,215,667RGD_MAPPER_PIPELINERGSC3.4





References


Region

Position Markers

Flank 1 / 1 (D13Hmgc64)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21343,763,752 - 43,763,948 (+)MAPPER
Rnor_6.01349,102,205 - 49,102,400NCBI
Rnor_5.01354,170,894 - 54,171,089UniSTS
RGSC_v3.41345,215,472 - 45,215,667UniSTS
Celera1344,098,614 - 44,098,806UniSTS
Cytogenetic Map13q13UniSTS

Flank 2 / 1 -new marker (RN34_13048990782)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.41348,990,782 - 48,990,782RGD

Flank 2 / 1 -old marker (D13Rat101)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21347,841,075 - 47,841,255 (+)MAPPER
Rnor_6.01353,264,698 - 53,264,877NCBI
Rnor_5.01358,314,588 - 58,314,767UniSTS
RGSC_v3.41349,428,397 - 49,428,577RGD
RGSC_v3.41349,428,398 - 49,428,577UniSTS
RGSC_v3.11349,442,478 - 49,442,657RGD
Celera1348,152,996 - 48,153,175UniSTS
RH 3.4 Map13148.8UniSTS
RH 3.4 Map13148.8RGD
FHH x ACI Map1319.33UniSTS
FHH x ACI Map1319.33RGD
Strain QTL Data
Symbol Name Trait
Bp328 Blood pressure QTL 328 arterial blood pressure trait   (VT:2000000)    
Mcs27 Mammary carcinoma susceptibility QTL 27 mammary gland integrity trait   (VT:0010552)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-04-06 SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi    SS.BN-(D13Rat123-D13Rat101)/Mcwi    Symbol updated 68687 APPROVED
2017-04-06 SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi    SS.BN-(D13Rat123-D13Rat101)/Mcwi    Symbol updated 68687 APPROVED