Strain Report - Rat Genome Database

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Strain: ACI.COP-(D3Mgh16-D3Rat119)/Shul

Symbol: ACI.COP-(D3Mgh16-D3Rat119)/Shul
Strain: ACI.COP-(D3Mgh16-D3Rat119)
Substrain: Shul
RGD ID: 2292565
Citation ID: RRID:RGD_2292565
Ontology ID: RS:0001159
Also Known As: ACI.COP-Ept6; ACI.COP-Ept6; Ept6; ACI.COP-(D3Mgh16-D3Rat119)/Shul
Type: congenic
Available Source: Not Available
Origination: Department of Genetics, Cell Biology and Anatomy, University Of Nebraska Medical Center, Omaha, Nebraska
Description: Female COP/CrCrl and male ACI/SegHsd were crossed to get F1 progeny which were in turn backcrossed with female ACI/SegHsd; the offsprings were genotyped
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2310,778,704 - 55,223,816RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.036,000,748 - 56,715,367RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0311,361,699 - 63,334,520RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.436,373,335 - 52,643,538RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mammary tumor number

References

References - curated
# Reference Title Reference Citation
1. Tissue-Specific Actions of the Ept1, Ept2, Ept6, and Ept9 Genetic Determinants of Responsiveness to Estrogens in the Female Rat. Kurz SG, etal., Endocrinology. 2008 Apr 17;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D3Mgh16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2310,778,704 - 10,778,823 (+)MAPPER
Rnor_6.036,000,748 - 6,000,866NCBI
Rnor_5.0311,361,699 - 11,361,817UniSTS
RGSC_v3.436,373,335 - 6,373,454RGD
RGSC_v3.436,373,336 - 6,373,454UniSTS
RGSC_v3.136,373,636 - 6,373,754RGD
Celera35,573,283 - 5,573,401UniSTS
RH 3.4 Map316.9UniSTS
RH 3.4 Map316.9RGD
Cytogenetic Map3p12UniSTS

Flank 2 / 1 (D3Rat119)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2355,223,631 - 55,223,816 (+)MAPPER
Rnor_6.0356,715,183 - 56,715,367NCBI
Rnor_5.0363,334,336 - 63,334,520UniSTS
RGSC_v3.4352,643,354 - 52,643,538UniSTS
RGSC_v3.4352,643,353 - 52,643,535RGD
RGSC_v3.1352,539,725 - 52,539,907RGD
Celera354,780,707 - 54,780,891UniSTS
RH 3.4 Map4528.24RGD
RH 3.4 Map4528.24UniSTS
RH 2.0 Map3439.0RGD
SHRSP x BN Map337.2498RGD
FHH x ACI Map340.5599RGD
Cytogenetic Map3q21UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other COP allele enhanced the induction of pituitary growth by E2 2292503

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-11-07 ACI.COP-(D3Mgh16-D3Rat119)/Shul    ACI.COP-(D3Mgh16-D3Rat119)/Shul    Name updated 68913 APPROVED
2014-11-07 ACI.COP-(D3Mgh16-D3Rat119)/Shul    ACI.COP-(D3Mgh16-D3Rat119)/Shul    Name updated 68913 APPROVED