Strain Report - Rat Genome Database

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Strain: SS.LEW-(D10Mco30-D10Got107)/Ayd

Symbol: SS.LEW-(D10Mco30-D10Got107)/Ayd
Strain: SS.LEW-(D10Mco30-D10Got107)
Substrain: Ayd
RGD ID: 2292385
Citation ID: RRID:RGD_2292385
Ontology ID: RS:0001521
Previously known as: C10S.L32; SS.LEW-(D10Mco30-D10Got107)/Ayd; c10sl32; SS.LEW-(D10Mco30-D10Got107)/Ayd
Type: congenic
Source: Research Centre, Centre Hospitalier de l'Universite de Montreal (CHUM), Montreal, Quebec, Canada
Origin: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Rat27-Igfbp4)/Ayd.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21073,887,148 - 75,121,215RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01076,420,583 - 77,803,328RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01073,693,979 - 77,664,589RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41077,547,289 - 78,712,717RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure


References - curated
# Reference Title Reference Citation
1. Modularization and epistatic hierarchy determine homeostatic actions of multiple blood pressure quantitative trait loci. Chauvet C, etal., Hum Mol Genet. 2013 Nov 15;22(22):4451-9. doi: 10.1093/hmg/ddt294. Epub 2013 Jun 28.
2. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D10Mco30)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21073,887,148 - 73,887,455 (+)MAPPER
Rnor_6.01076,420,583 - 76,420,889NCBI
Rnor_5.01073,693,979 - 73,694,285UniSTS
RGSC_v3.41077,547,353 - 77,547,622RGD
RGSC_v3.41077,547,289 - 77,547,595UniSTS
RGSC_v3.11077,561,658 - 77,561,965RGD
Celera1072,791,736 - 72,792,042UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Got107)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21075,121,117 - 75,121,215 (+)MAPPER
Rnor_6.01077,803,231 - 77,803,328NCBI
Rnor_5.01077,664,492 - 77,664,589UniSTS
RGSC_v3.41078,712,620 - 78,712,717RGD
RGSC_v3.41078,712,620 - 78,712,717UniSTS
RGSC_v3.11078,726,990 - 78,727,087RGD
RH 3.4 Map10673.5RGD
RH 3.4 Map10673.5UniSTS
RH 2.0 Map10798.8RGD

Additional Information